RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SUMO2P61956 95 aaKnown RBP14.41□□□□□ -0.1
HDAC1-201ENST00000373548 ODF3L2Q3SX64 289 aa14.41□□□□□ -0.1
HDAC1-201ENST00000373548 TCAPO15273 167 aa14.41□□□□□ -0.1
HDAC1-201ENST00000373548 SMIM17P0DL12 118 aa14.41□□□□□ -0.1
HDAC1-201ENST00000373548 C20orf78Q9BR46 151 aa14.41□□□□□ -0.1
HDAC1-201ENST00000373548 LAGE3Q14657 143 aa14.4□□□□□ -0.1
HDAC1-201ENST00000373548 C18orf15Q96N68 181 aa14.4□□□□□ -0.1
HDAC1-201ENST00000373548 SNHG12Q9BXW3 62 aa14.4□□□□□ -0.1
HDAC1-201ENST00000373548 TRGV11A0A075B6L2 103 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 A0A087WWL8 130 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 CBY3A6NI87 242 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 LGALS9BQ3B8N2 356 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 LGALS9CQ6DKI2 356 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 SYT8Q8NBV8 401 aa14.39□□□□□ -0.11
HDAC1-201ENST00000373548 ST20Q9HBF5 79 aa14.38□□□□□ -0.11
HDAC1-201ENST00000373548 INAFM1C9JVW0 142 aa14.37□□□□□ -0.11
HDAC1-201ENST00000373548 SUMO4Q6EEV6 95 aa14.37□□□□□ -0.11
HDAC1-201ENST00000373548 M0R143 59 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 PPP1R17O96001 155 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 Q6ZN92 141 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 GOLT1BQ9Y3E0 138 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 HSBP1L1C9JCN9 74 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 CLUHP3Q96NS8 147 aa14.36□□□□□ -0.11
HDAC1-201ENST00000373548 CRYGDP07320 174 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 HTN1P15515 57 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 KRTAP10-3P60369 221 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 LBHQ53QV2 105 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-201ENST00000373548 C2orf88Q9BSF0 95 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 SAP30O75446 220 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 ZNF876PQ49A33 203 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 FAM74A4Q5TZK3 123 aa14.35□□□□□ -0.11
HDAC1-201ENST00000373548 F5H697 171 aa14.34□□□□□ -0.11
HDAC1-201ENST00000373548 PRM2P04554 102 aa14.34□□□□□ -0.11
HDAC1-201ENST00000373548 HNRNPA3P51991 378 aaKnown RBP14.34□□□□□ -0.11
HDAC1-201ENST00000373548 MRPL52Q86TS9 123 aaKnown RBP14.34□□□□□ -0.11
HDAC1-201ENST00000373548 OR11H12B2RN74 326 aa14.33□□□□□ -0.11
HDAC1-201ENST00000373548 NUDT3O95989 172 aa14.33□□□□□ -0.11
HDAC1-201ENST00000373548 CSTL1Q9H114 145 aa14.33□□□□□ -0.11
HDAC1-201ENST00000373548 ORMDL2Q53FV1 153 aa14.33□□□□□ -0.12
HDAC1-201ENST00000373548 K7EMI3 77 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 DKK2Q9UBU2 259 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 ATP5LO75964 103 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 INSP01308 110 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 IGLV1-51P01701 117 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 STHQ8IWL8 128 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 TP73-AS1Q9UF72 201 aa14.32□□□□□ -0.12
HDAC1-201ENST00000373548 RPL32P62910 135 aaKnown RBP14.31□□□□□ -0.12
HDAC1-201ENST00000373548 ZNF56Q15929 161 aa14.31□□□□□ -0.12
HDAC1-201ENST00000373548 TRPT1Q86TN4 253 aaKnown RBP14.31□□□□□ -0.12
HDAC1-201ENST00000373548 LINC00467Q9BRT7 94 aa14.31□□□□□ -0.12
HDAC1-201ENST00000373548 PRSS1P07477 247 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 ODF1Q14990 250 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 NEGR1Q7Z3B1 354 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 LINC01587Q99440 93 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 POLR2KP53803 58 aaKnown RBP14.3□□□□□ -0.12
HDAC1-201ENST00000373548 NDUFA11Q86Y39 141 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 XCL2Q9UBD3 114 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
HDAC1-201ENST00000373548 NSD1Q96L73 2696 aaPredicted RBP14.3□□□□□ -0.12
HDAC1-201ENST00000373548 M0QY20 66 aa14.29□□□□□ -0.12
HDAC1-201ENST00000373548 ZNF415Q09FC8 603 aa14.29□□□□□ -0.12
HDAC1-201ENST00000373548 ANKRD39Q53RE8 183 aa14.29□□□□□ -0.12
HDAC1-201ENST00000373548 MORN3Q6PF18 240 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-201ENST00000373548 TOMM6Q96B49 74 aa14.29□□□□□ -0.12
HDAC1-201ENST00000373548 MRPS16Q9Y3D3 137 aaKnown RBP14.29□□□□□ -0.12
HDAC1-201ENST00000373548 FN1P02751 2386 aaKnown RBP14.29□□□□□ -0.12
HDAC1-201ENST00000373548 TRBV6-5A0A0K0K1A5 114 aa14.28□□□□□ -0.12
HDAC1-201ENST00000373548 A0A1B0GV90 55 aa14.28□□□□□ -0.12
HDAC1-201ENST00000373548 C11orf72Q8NBR9 251 aa14.28□□□□□ -0.12
HDAC1-201ENST00000373548 SLC25A34Q6PIV7 304 aa14.27□□□□□ -0.12
HDAC1-201ENST00000373548 ZMAT4Q9H898 229 aa14.27□□□□□ -0.12
HDAC1-201ENST00000373548 M0R2P5 195 aa14.27□□□□□ -0.13
HDAC1-201ENST00000373548 STPG4Q8N801 248 aa14.27□□□□□ -0.13
HDAC1-201ENST00000373548 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 CMC4P56277 68 aaPredicted RBP14.26□□□□□ -0.13
HDAC1-201ENST00000373548 C2orf66Q6UXQ4 117 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 NACAE9PAV3 2078 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 C2CD3Q4AC94 2353 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 VCYO14598 125 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 FOSL1P15407 271 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 BEAN1Q3B7T3 259 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 C1orf158Q8N1D5 194 aa14.26□□□□□ -0.13
HDAC1-201ENST00000373548 CYSRT1A8MQ03 144 aa14.25□□□□□ -0.13
HDAC1-201ENST00000373548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.25□□□□□ -0.13
HDAC1-201ENST00000373548 BATFQ16520 125 aa14.25□□□□□ -0.13
HDAC1-201ENST00000373548 SCGB3A1Q96QR1 104 aa14.25□□□□□ -0.13
HDAC1-201ENST00000373548 NIPBLQ6KC79 2804 aaeCLIP14.25□□□□□ -0.133e-6■■■■■ 33.4
HDAC1-201ENST00000373548 TRBV27A0A0K0K1C4 114 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 COX8AP10176 69 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 PIK3CD-AS1Q5SR53 167 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 PTH2Q96A98 100 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 C19orf73Q9NVV2 129 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 DEFB104AQ8WTQ1 72 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 FAM110AQ9BQ89 295 aa14.24□□□□□ -0.13
HDAC1-201ENST00000373548 ZFP2Q6ZN57 461 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 TMEM208Q9BTX3 173 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 A8MWV9 139 aa14.23□□□□□ -0.13
HDAC1-201ENST00000373548 PF4P02776 101 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms