RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 DKK2Q9UBU2 259 aa13.71□□□□□ -0.22
VEGFA-206ENST00000372077 C9orf47Q6ZRZ4 202 aa13.7□□□□□ -0.22
VEGFA-206ENST00000372077 SCRT2Q9NQ03 307 aa13.7□□□□□ -0.22
VEGFA-206ENST00000372077 FER1L6-AS1Q8NA97 138 aa13.7□□□□□ -0.22
VEGFA-206ENST00000372077 HSPB8Q9UJY1 196 aa13.7□□□□□ -0.22
VEGFA-206ENST00000372077 CRXO43186 299 aaPredicted RBP13.69□□□□□ -0.22
VEGFA-206ENST00000372077 INSL3P51460 131 aa13.69□□□□□ -0.22
VEGFA-206ENST00000372077 PSMG4Q5JS54 123 aa13.69□□□□□ -0.22
VEGFA-206ENST00000372077 OR10AG1Q8NH19 301 aa13.69□□□□□ -0.22
VEGFA-206ENST00000372077 AGPAT4-IT1Q9H0P7 198 aa13.69□□□□□ -0.22
VEGFA-206ENST00000372077 C9orf66Q5T8R8 295 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 FAM104BQ5XKR9 115 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 PCP2Q8IVA1 136 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 A0A1B0GV72 72 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 DEFB125Q8N687 156 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 C11orf21Q9P2W6 132 aa13.68□□□□□ -0.22
VEGFA-206ENST00000372077 OR10J6PQ8NGY7 276 aa13.67□□□□□ -0.22
VEGFA-206ENST00000372077 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
VEGFA-206ENST00000372077 F6UB75 175 aa13.67□□□□□ -0.22
VEGFA-206ENST00000372077 G3V4G9 280 aa13.66□□□□□ -0.22
VEGFA-206ENST00000372077 COX8CQ7Z4L0 72 aa13.66□□□□□ -0.22
VEGFA-206ENST00000372077 ZNF575Q86XF7 245 aa13.66□□□□□ -0.22
VEGFA-206ENST00000372077 TMEM78Q5T7P6 136 aa13.66□□□□□ -0.22
VEGFA-206ENST00000372077 MAP6D1Q9H9H5 199 aa13.66□□□□□ -0.22
VEGFA-206ENST00000372077 DEFB131AP59861 70 aa13.65□□□□□ -0.22
VEGFA-206ENST00000372077 BEAN1Q3B7T3 259 aa13.65□□□□□ -0.22
VEGFA-206ENST00000372077 A0A0J9YX75 114 aa13.65□□□□□ -0.22
VEGFA-206ENST00000372077 PET117Q6UWS5 81 aa13.65□□□□□ -0.22
VEGFA-206ENST00000372077 FAM231BA6NCW3 169 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 HIST1H1AQ02539 215 aaPredicted RBP13.64□□□□□ -0.23
VEGFA-206ENST00000372077 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 C2orf91Q6ZV80 131 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 LENEPQ9Y5L5 61 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 LINC01545Q5VT33 79 aa13.64□□□□□ -0.23
VEGFA-206ENST00000372077 LEPP41159 167 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 ODF3L2Q3SX64 289 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 C7orf71A4D174 169 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 WIPF1O43516 503 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 CMC4P56277 68 aaPredicted RBP13.63□□□□□ -0.23
VEGFA-206ENST00000372077 MDFIQ99750 246 aa13.63□□□□□ -0.23
VEGFA-206ENST00000372077 PRSS1P07477 247 aa13.62□□□□□ -0.23
VEGFA-206ENST00000372077 FAM110AQ9BQ89 295 aa13.62□□□□□ -0.23
VEGFA-206ENST00000372077 TRBV7-9A0A0J9YWB2 115 aa13.61□□□□□ -0.23
VEGFA-206ENST00000372077 DUSP14O95147 198 aaKnown RBP13.61□□□□□ -0.23
VEGFA-206ENST00000372077 IFI27L1Q96BM0 104 aa13.61□□□□□ -0.23
VEGFA-206ENST00000372077 TRAV26-1A0A087WT03 109 aa13.61□□□□□ -0.23
VEGFA-206ENST00000372077 IGKV3D-20A0A0C4DH25 116 aa13.61□□□□□ -0.23
VEGFA-206ENST00000372077 CRYBA4P53673 196 aa13.61□□□□□ -0.23
VEGFA-206ENST00000372077 A8MTW9 85 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 IGKV2D-26A0A0A0MRZ7 120 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 HLA-DRB4P13762 266 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 GTSCR1Q86UQ5 136 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 ODF3Q96PU9 254 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 HLA-DRB4X5D2U9 266 aa13.6□□□□□ -0.23
VEGFA-206ENST00000372077 KNCNA6PVL3 124 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 H3BVH4 76 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 RNF185Q96GF1 192 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 C19orf73Q9NVV2 129 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 FABP5P3A8MUU1 101 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 OR11H12B2RN74 326 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 M0R381 172 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 HBDP02042 147 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 COX8AP10176 69 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 SMAGPQ0VAQ4 97 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 PRR9Q5T870 116 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 APRG1Q8IVJ8 170 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 VWFP04275 2813 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 H3BMM0 161 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 H3BUT2 72 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 CD7P09564 240 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 AZU1P20160 251 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 TMEM97Q5BJF2 176 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 ZFAND2AQ8N6M9 145 aa13.59□□□□□ -0.23
VEGFA-206ENST00000372077 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
VEGFA-206ENST00000372077 GTSF1LQ9H1H1 148 aa13.58□□□□□ -0.24
VEGFA-206ENST00000372077 COL6A5A8TX70 2615 aa13.58□□□□□ -0.24
VEGFA-206ENST00000372077 STAB1Q9NY15 2570 aa13.57□□□□□ -0.24
VEGFA-206ENST00000372077 GAGE10A6NGK3 116 aa13.57□□□□□ -0.24
VEGFA-206ENST00000372077 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
VEGFA-206ENST00000372077 AGRNO00468 2067 aa13.57□□□□□ -0.24
VEGFA-206ENST00000372077 K7ERJ3 54 aa13.56□□□□□ -0.24
VEGFA-206ENST00000372077 ZNF493Q6ZR52 646 aa13.56□□□□□ -0.24
VEGFA-206ENST00000372077 NEGR1Q7Z3B1 354 aa13.56□□□□□ -0.24
VEGFA-206ENST00000372077 TRRAPQ9Y4A5 3859 aa13.55□□□□□ -0.24
VEGFA-206ENST00000372077 IGLC6P0CF74 106 aa13.55□□□□□ -0.24
VEGFA-206ENST00000372077 SCGB1A1P11684 91 aa13.55□□□□□ -0.24
VEGFA-206ENST00000372077 SPANXN1Q5VSR9 72 aa13.55□□□□□ -0.24
VEGFA-206ENST00000372077 KLLNB2CW77 178 aa13.55□□□□□ -0.24
VEGFA-206ENST00000372077 IGKV3-20P01619 116 aa13.54□□□□□ -0.24
VEGFA-206ENST00000372077 FGF6P10767 208 aa13.54□□□□□ -0.24
VEGFA-206ENST00000372077 Q6AWC8 147 aa13.54□□□□□ -0.24
VEGFA-206ENST00000372077 MAP1LC3AQ9H492 121 aa13.54□□□□□ -0.24
VEGFA-206ENST00000372077 GCSHP23434 173 aa13.54□□□□□ -0.24
VEGFA-206ENST00000372077 RBMY1BA6NDE4 496 aaKnown RBP13.54□□□□□ -0.24
VEGFA-206ENST00000372077 RBMY1EA6NEQ0 496 aaKnown RBP13.54□□□□□ -0.24
VEGFA-206ENST00000372077 RBMY1DP0C7P1 496 aaKnown RBP13.54□□□□□ -0.24
VEGFA-206ENST00000372077 CKS1BP61024 79 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms