RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
LDB3-203ENST00000372056 STHQ8IWL8 128 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 MAP1LC3AQ9H492 121 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 A0A096LNJ9 63 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 CD7P09564 240 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 ORAOV1Q8WV07 137 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
LDB3-203ENST00000372056 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
LDB3-203ENST00000372056 NRACQ8N912 160 aa9.54□□□□□ -0.88
LDB3-203ENST00000372056 MRAP2Q96G30 205 aa9.54□□□□□ -0.88
LDB3-203ENST00000372056 IGHV3-16A0A0C4DH30 117 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 BATFQ16520 125 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 MORN3Q6PF18 240 aaPredicted RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 SPATA12Q7Z6I5 190 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 DEFB125Q8N687 156 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 STPG4Q8N801 248 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 AP1S3Q96PC3 154 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 MRPS16Q9Y3D3 137 aaKnown RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 C14orf178Q8N769 122 aaPredicted RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 C9orf85Q96MD7 179 aa9.53□□□□□ -0.88
LDB3-203ENST00000372056 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
LDB3-203ENST00000372056 C20orf202A1L168 122 aa9.52□□□□□ -0.89
LDB3-203ENST00000372056 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
LDB3-203ENST00000372056 Q8N1Y9 231 aa9.52□□□□□ -0.89
LDB3-203ENST00000372056 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
LDB3-203ENST00000372056 MUC4Q99102 2169 aa9.52□□□□□ -0.89
LDB3-203ENST00000372056 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
LDB3-203ENST00000372056 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 HNRNPA3P51991 378 aaKnown RBP9.51□□□□□ -0.89
LDB3-203ENST00000372056 FXYD7P58549 80 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
LDB3-203ENST00000372056 Q6ZN92 141 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 MDFICQ9P1T7 246 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 HBDP02042 147 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 PET117Q6UWS5 81 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 ATOH7Q8N100 152 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 Q8N8P6 123 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
LDB3-203ENST00000372056 TRPT1Q86TN4 253 aaKnown RBP9.5□□□□□ -0.89
LDB3-203ENST00000372056 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
LDB3-203ENST00000372056 RASL10AQ92737 203 aa9.5□□□□□ -0.89
LDB3-203ENST00000372056 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
LDB3-203ENST00000372056 JMJD1CQ15652 2540 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 LINC00315P59091 139 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 INSP01308 110 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 MGPP08493 103 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 C19orf73Q9NVV2 129 aa9.49□□□□□ -0.89
LDB3-203ENST00000372056 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
LDB3-203ENST00000372056 RIPPLY3P57055 190 aa9.48□□□□□ -0.89
LDB3-203ENST00000372056 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
LDB3-203ENST00000372056 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
LDB3-203ENST00000372056 JPT2Q9H910 190 aa9.48□□□□□ -0.89
LDB3-203ENST00000372056 CBY3A6NI87 242 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 K7EP13 123 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 CCL25O15444 150 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 FCER1GP30273 86 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 MAJINQ3KP22 176 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 C20orf78Q9BR46 151 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 COX11Q9Y6N1 276 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 TEP1Q99973 2627 aaKnown RBP9.47□□□□□ -0.89
LDB3-203ENST00000372056 H0Y8G0 127 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
LDB3-203ENST00000372056 UBE2V1Q13404 147 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 ANKRD39Q53RE8 183 aa9.47□□□□□ -0.89
LDB3-203ENST00000372056 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
LDB3-203ENST00000372056 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 A0A087WWL8 130 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 PPP1R17O96001 155 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 IGLL1P15814 213 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 PCP4P48539 62 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.9
LDB3-203ENST00000372056 LAGE3Q14657 143 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 RBX1P62877 108 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 PIK3CD-AS1Q5SR53 167 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 SUMO4Q6EEV6 95 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 IFI27L1Q96BM0 104 aa9.45□□□□□ -0.9
LDB3-203ENST00000372056 CRYGDP07320 174 aa9.44□□□□□ -0.9
LDB3-203ENST00000372056 HTN1P15515 57 aa9.44□□□□□ -0.9
LDB3-203ENST00000372056 APOC4P55056 127 aa9.44□□□□□ -0.9
LDB3-203ENST00000372056 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
LDB3-203ENST00000372056 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
LDB3-203ENST00000372056 VWFP04275 2813 aa9.43□□□□□ -0.9
LDB3-203ENST00000372056 HINT1P49773 126 aaPredicted RBP9.43□□□□□ -0.9
LDB3-203ENST00000372056 RNASE8Q8TDE3 154 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms