RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 UBE2G1P62253 170 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 SNRPD3P62318 126 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 HIST1H1AQ02539 215 aaPredicted RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 ADIRFQ15847 76 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 C9orf66Q5T8R8 295 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 FOXI2Q6ZQN5 318 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 Q6ZQT7 251 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZNF664Q8N3J9 261 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ISOC2Q96AB3 205 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZC2HC1AQ96GY0 325 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 FAM19A4Q96LR4 140 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 LINC00477Q96M19 166 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZNF492Q9P255 531 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 CSDC2Q9Y534 153 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 LY96Q9Y6Y9 160 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 NOTCH1P46531 2555 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 TGIF2-C20orf24A0A0A6YYL0 155 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 A8MTW9 85 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 H3BMM0 161 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 M0R036 132 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 GZMBP10144 247 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 MGST1P10620 155 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 NDUFA6P56556 154 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 RIGQ13278 110 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 C6orf226Q5I0X4 101 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ACTL10Q5JWF8 245 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 PRR9Q5T870 116 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 AMTNQ6UX39 209 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 ZFAND2AQ8N6M9 145 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 OR10J6PQ8NGY7 276 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 MIEN1Q9BRT3 115 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 MCRIP2Q9BUT9 160 aaKnown RBP2.59□□□□□ -1.99
MCF2-202ENST00000370573 WFDC10AQ9H1F0 79 aa2.59□□□□□ -1.99
MCF2-202ENST00000370573 MGAM2Q2M2H8 2515 aa2.59□□□□□ -2
MCF2-202ENST00000370573 C19orf71A6NCJ1 209 aa2.58□□□□□ -2
MCF2-202ENST00000370573 KRTAP29-1A8MX34 341 aaPredicted RBP2.58□□□□□ -2
MCF2-202ENST00000370573 OR11H12B2RN74 326 aa2.58□□□□□ -2
MCF2-202ENST00000370573 IGKV3-20P01619 116 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HLA-DRB4P13762 266 aa2.58□□□□□ -2
MCF2-202ENST00000370573 RPL35AP18077 110 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 RIPPLY3P57055 190 aa2.58□□□□□ -2
MCF2-202ENST00000370573 MRPL23Q16540 153 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 TMEM78Q5T7P6 136 aa2.58□□□□□ -2
MCF2-202ENST00000370573 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
MCF2-202ENST00000370573 OR4B1Q8NGF8 309 aa2.58□□□□□ -2
MCF2-202ENST00000370573 IMMP2LQ96T52 175 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BLQ99880 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 RNASE7Q9H1E1 156 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 NAGKQ9UJ70 344 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HLA-DRB4X5D2U9 266 aa2.58□□□□□ -2
MCF2-202ENST00000370573 NBEAL2Q6ZNJ1 2754 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BKO60814 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 DUSP14O95147 198 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BJP06899 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 CRISP2P16562 243 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BOP23527 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BBP33778 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 RNASE4P34096 147 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 RPS10P46783 165 aaKnown RBP2.58□□□□□ -2
MCF2-202ENST00000370573 FXYD7P58549 80 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BDP58876 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BCP62807 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST2H2BEQ16778 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.58□□□□□ -2
MCF2-202ENST00000370573 DEFB125Q8N687 156 aa2.58□□□□□ -2
MCF2-202ENST00000370573 OR10G8Q8NGN5 311 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BHQ93079 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 SFRP2Q96HF1 295 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BNQ99877 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 HIST1H2BMQ99879 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 VPS25Q9BRG1 176 aa2.58□□□□□ -2
MCF2-202ENST00000370573 PRO1933Q9H354 126 aa2.58□□□□□ -2
MCF2-202ENST00000370573 OSTCQ9NRP0 149 aa2.58□□□□□ -2
MCF2-202ENST00000370573 SPANXA1Q9NS26 97 aa2.58□□□□□ -2
MCF2-202ENST00000370573 TRBV24-1A0A075B6N3 115 aa2.57□□□□□ -2
MCF2-202ENST00000370573 TRAV12-2A0A075B6T6 113 aa2.57□□□□□ -2
MCF2-202ENST00000370573 KLLNB2CW77 178 aa2.57□□□□□ -2
MCF2-202ENST00000370573 G3V4G9 280 aa2.57□□□□□ -2
MCF2-202ENST00000370573 M0R2Z0 102 aa2.57□□□□□ -2
MCF2-202ENST00000370573 SH2D1AO60880 128 aa2.57□□□□□ -2
MCF2-202ENST00000370573 GIG44P09565 113 aaPredicted RBP2.57□□□□□ -2
MCF2-202ENST00000370573 XGP55808 180 aa2.57□□□□□ -2
MCF2-202ENST00000370573 CMC4P56277 68 aaPredicted RBP2.57□□□□□ -2
MCF2-202ENST00000370573 SPINK13Q1W4C9 94 aa2.57□□□□□ -2
MCF2-202ENST00000370573 FAM231DQ6ZW35 169 aa2.57□□□□□ -2
MCF2-202ENST00000370573 TRPT1Q86TN4 253 aaKnown RBP2.57□□□□□ -2
MCF2-202ENST00000370573 ODF3Q96PU9 254 aa2.57□□□□□ -2
MCF2-202ENST00000370573 LENEPQ9Y5L5 61 aa2.57□□□□□ -2
MCF2-202ENST00000370573 V9GYV3 84 aa2.57□□□□□ -2
MCF2-202ENST00000370573 DNHD1Q96M86 4753 aa2.57□□□□□ -2
MCF2-202ENST00000370573 TRBV7-9A0A0J9YWB2 115 aa2.57□□□□□ -2
MCF2-202ENST00000370573 FABP5P3A8MUU1 101 aa2.57□□□□□ -2
MCF2-202ENST00000370573 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
MCF2-202ENST00000370573 ZNF324O75467 553 aaPredicted RBP2.57□□□□□ -2
MCF2-202ENST00000370573 GPX1P07203 203 aa2.57□□□□□ -2
MCF2-202ENST00000370573 PFN1P07737 140 aaKnown RBP2.57□□□□□ -2
MCF2-202ENST00000370573 RBMY1A1P0DJD3 496 aaKnown RBP2.57□□□□□ -2
MCF2-202ENST00000370573 RBMY1CP0DJD4 496 aa2.57□□□□□ -2
MCF2-202ENST00000370573 FABP4P15090 132 aa2.57□□□□□ -2
MCF2-202ENST00000370573 LEPP41159 167 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms