RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 LINC01545Q5VT33 79 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
UBE3D-203ENST00000369747 TRAV2A0A0B4J234 112 aa12.73□□□□□ -0.37
UBE3D-203ENST00000369747 PRSS47A8MTI9 375 aa12.73□□□□□ -0.37
UBE3D-203ENST00000369747 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 DUSP14O95147 198 aaKnown RBP12.72□□□□□ -0.37
UBE3D-203ENST00000369747 NXPH4O95158 308 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 ZNF124Q15973 351 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 DEFB125Q8N687 156 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 SNHG12Q9BXW3 62 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 WIPF1O43516 503 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 CDKN1BP46527 198 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 SPINK13Q1W4C9 94 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 Q8N8P6 123 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 DPH3P1Q9H4G8 78 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 UQCR10Q9UDW1 63 aa12.72□□□□□ -0.37
UBE3D-203ENST00000369747 CD7P09564 240 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 DEFB131AP59861 70 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 KRTAP21-3Q3LHN1 58 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 ODF3L2Q3SX64 289 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
UBE3D-203ENST00000369747 C2orf88Q9BSF0 95 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.37
UBE3D-203ENST00000369747 TSPOP30536 169 aa12.7□□□□□ -0.38
UBE3D-203ENST00000369747 LBHQ53QV2 105 aaPredicted RBP12.7□□□□□ -0.38
UBE3D-203ENST00000369747 PMCHL2Q9BQD1 86 aa12.7□□□□□ -0.38
UBE3D-203ENST00000369747 hDV102S1A0JD36 115 aa12.69□□□□□ -0.38
UBE3D-203ENST00000369747 KNCNA6PVL3 124 aa12.69□□□□□ -0.38
UBE3D-203ENST00000369747 M0R143 59 aa12.69□□□□□ -0.38
UBE3D-203ENST00000369747 FCER1GP30273 86 aa12.69□□□□□ -0.38
UBE3D-203ENST00000369747 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
UBE3D-203ENST00000369747 RASL10AQ92737 203 aa12.68□□□□□ -0.38
UBE3D-203ENST00000369747 WFDC10AQ9H1F0 79 aa12.68□□□□□ -0.38
UBE3D-203ENST00000369747 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
UBE3D-203ENST00000369747 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
UBE3D-203ENST00000369747 IFI27L1Q96BM0 104 aa12.68□□□□□ -0.38
UBE3D-203ENST00000369747 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
UBE3D-203ENST00000369747 A8MTW9 85 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 G3V4G9 280 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 Q6ZN92 141 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 C9orf85Q96MD7 179 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
UBE3D-203ENST00000369747 IGHV1OR15-1A0A075B7D0 117 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 OR11H12B2RN74 326 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 MGPP08493 103 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 LINC00315P59091 139 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 LGALS9BQ3B8N2 356 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 LGALS9CQ6DKI2 356 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 MDFICQ9P1T7 246 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 KRTAP10-11P60412 298 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 Q8N1Y9 231 aa12.66□□□□□ -0.38
UBE3D-203ENST00000369747 H3BMM0 161 aa12.65□□□□□ -0.38
UBE3D-203ENST00000369747 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
UBE3D-203ENST00000369747 SMIM2Q9BVW6 85 aa12.65□□□□□ -0.38
UBE3D-203ENST00000369747 JPT2Q9H910 190 aa12.65□□□□□ -0.38
UBE3D-203ENST00000369747 A0A1B0GV90 55 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1BA6NDE4 496 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1EA6NEQ0 496 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 TCAPO15273 167 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1DP0C7P1 496 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 LAGE3Q14657 143 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 HSBP1L1C9JCN9 74 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
UBE3D-203ENST00000369747 GTSCR1Q86UQ5 136 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 GOLT1BQ9Y3E0 138 aa12.64□□□□□ -0.39
UBE3D-203ENST00000369747 EGFEM1PQ0D2K5 195 aa12.63□□□□□ -0.39
UBE3D-203ENST00000369747 FAM110AQ9BQ89 295 aa12.63□□□□□ -0.39
UBE3D-203ENST00000369747 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
UBE3D-203ENST00000369747 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
UBE3D-203ENST00000369747 TP73-AS1Q9UF72 201 aa12.62□□□□□ -0.39
UBE3D-203ENST00000369747 DNAH3Q8TD57 4116 aa12.62□□□□□ -0.39
UBE3D-203ENST00000369747 A0A087WWL8 130 aa12.6□□□□□ -0.39
UBE3D-203ENST00000369747 CMC4P56277 68 aaPredicted RBP12.6□□□□□ -0.39
UBE3D-203ENST00000369747 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
UBE3D-203ENST00000369747 TRGV11A0A075B6L2 103 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 PPP1R17O96001 155 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 SUMO4Q6EEV6 95 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 STHQ8IWL8 128 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 DKK2Q9UBU2 259 aa12.59□□□□□ -0.39
UBE3D-203ENST00000369747 CBY3A6NI87 242 aa12.58□□□□□ -0.4
UBE3D-203ENST00000369747 NUDT3O95989 172 aa12.58□□□□□ -0.4
UBE3D-203ENST00000369747 ODF1Q14990 250 aa12.58□□□□□ -0.4
UBE3D-203ENST00000369747 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
UBE3D-203ENST00000369747 K7EMI3 77 aa12.57□□□□□ -0.4
UBE3D-203ENST00000369747 ATP5LO75964 103 aa12.57□□□□□ -0.4
UBE3D-203ENST00000369747 NUTF2P61970 127 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms