RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CACNG7P62955 275 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 MIR17HGQ75NE6 70 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 VMO1Q7Z5L0 202 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 PDPNQ86YL7 162 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 OR4C13Q8NGP0 309 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 A8MWV9 139 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 PEX7O00628 323 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 NPYP01303 97 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 OR1L8Q8NGR8 309 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 CCDC168Q8NDH2 2452 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 C15orf61A6NNL5 157 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 UQCRQO14949 82 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 SDIM1Q6ZPB5 146 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 TRGV9Q99603 122 aa5.24□□□□□ -1.57
CSDE1-204ENST00000369530 AMMECR1Q9Y4X0 333 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-204ENST00000369530 EGFEM1PQ0D2K5 195 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 MLANAQ16655 118 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 ZNF833PQ6ZTB9 187 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 DUX3Q96PT4 197 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 NAV3Q8IVL0 2385 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 NDUFA3O95167 84 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 CAMPP49913 170 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 DEFB112Q30KQ8 113 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 IL17RELQ6ZVW7 336 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 TMEM116Q8NCL8 245 aa5.23□□□□□ -1.57
CSDE1-204ENST00000369530 UPK2O00526 184 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 SUB1P53999 127 aaKnown RBP eCLIP5.22□□□□□ -1.571e-8■■□□□ 13.6
CSDE1-204ENST00000369530 Q5XG85 94 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 WFDC9Q8NEX5 89 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 IGHV3OR16-10A0A075B7F0 116 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 EPM2AB3EWF7 344 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 HOXA3O43365 443 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-204ENST00000369530 Q6ZS46 218 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 TLN2Q9Y4G6 2542 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 CD7P09564 240 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 FMC1Q96HJ9 113 aa5.22□□□□□ -1.57
CSDE1-204ENST00000369530 APOBP04114 4563 aaKnown RBP5.22□□□□□ -1.57
CSDE1-204ENST00000369530 ATP5LO75964 103 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 IGLV2-23P01705 113 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 IL4P05112 153 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 RPL27AP46776 148 aaKnown RBP5.21□□□□□ -1.57
CSDE1-204ENST00000369530 Q6ZQT7 251 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 Q6ZSV7 163 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 NABP2Q9BQ15 211 aa5.21□□□□□ -1.57
CSDE1-204ENST00000369530 CNTFRP26992 372 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 ZNF138P52744 262 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 TMEM30BQ3MIR4 351 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 NPBQ8NG41 125 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 F11RQ9Y624 299 aaKnown RBP5.21□□□□□ -1.58
CSDE1-204ENST00000369530 LOC107984640A0A0U1RRK4 108 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 LINC01548A6NM66 108 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 CHEK1O14757 476 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 IGKCP01834 107 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 IGLC6P0CF74 106 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 P0DMU3 169 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 FAM231AP0DMU4 169 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 FAM231CP0DMU5 169 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 HIST1H4AP62805 103 aaKnown RBP5.21□□□□□ -1.58
CSDE1-204ENST00000369530 HERVK_113P63121 156 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 BEAN1Q3B7T3 259 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 SGK494Q96LW2 274 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 DKK2Q9UBU2 259 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 S4R3C0 116 aa5.21□□□□□ -1.58
CSDE1-204ENST00000369530 TIMM23O14925 209 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 IGLV1-40P01703 118 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 LINC00322Q6ZN03 302 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-204ENST00000369530 LINC01006Q8NI28 216 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 SRSF8Q9BRL6 282 aaKnown RBP5.2□□□□□ -1.58
CSDE1-204ENST00000369530 COX7A2P2O60397 106 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 LGALS1P09382 135 aaKnown RBP5.2□□□□□ -1.58
CSDE1-204ENST00000369530 RIGQ13278 110 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 MAPKAPK5-AS1Q8N8E1 139 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 TCL1BO95988 128 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 SCGB1C2P0DMR2 95 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 PRCDQ00LT1 54 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 ANXA2RQ3ZCQ2 193 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 MINOS1Q5TGZ0 78 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 DPM3Q9P2X0 92 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 FOXA2Q9Y261 457 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-204ENST00000369530 MINOS1-NBL1R4GNA1 71 aa5.2□□□□□ -1.58
CSDE1-204ENST00000369530 IGHV1-3A0A0C4DH29 117 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 A0A1B0GUT8 65 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 DPM2O94777 84 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 MALP21145 153 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 IFI27P40305 119 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-204ENST00000369530 RUSC1-AS1Q66K80 236 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 Q71RC1 249 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-204ENST00000369530 OR8A1Q8NGG7 326 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 FXYD5Q96DB9 178 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 TMEM14BQ9NUH8 114 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 PRO0628Q9UI54 55 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 CGB1A6NKQ9 187 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 BUB1B-PAK6H3BSN5 160 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 LGALS9O00182 355 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 IGF1P05019 195 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 PRSS3P2Q8NHM4 247 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 RNF125Q96EQ8 232 aa5.19□□□□□ -1.58
CSDE1-204ENST00000369530 EPDR1Q9UM22 224 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms