RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 MRPL51Q4U2R6 128 aaKnown RBP7.23□□□□□ -1.25
TPM3-210ENST00000368530 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
TPM3-210ENST00000368530 RNASEKQ6P5S7 137 aaKnown RBP7.23□□□□□ -1.25
TPM3-210ENST00000368530 ZNF493Q6ZR52 646 aa7.23□□□□□ -1.25
TPM3-210ENST00000368530 TMEM18Q96B42 140 aa7.23□□□□□ -1.25
TPM3-210ENST00000368530 SAMD10Q9BYL1 202 aa7.23□□□□□ -1.25
TPM3-210ENST00000368530 MUC4Q99102 2169 aa7.23□□□□□ -1.25
TPM3-210ENST00000368530 D6R8Y8 96 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 SNAI2O43623 268 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 NCR2O95944 276 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 OR5AL1P0C617 328 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 PMCHP20382 165 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 CACNG7P62955 275 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 KCNS1Q96KK3 526 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 C12orf57Q99622 126 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 CNFNQ9BYD5 112 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 LY6G6CO95867 125 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 RBMY1A1P0DJD3 496 aaKnown RBP7.22□□□□□ -1.25
TPM3-210ENST00000368530 RBMY1CP0DJD4 496 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 RNASE3P12724 160 aaKnown RBP7.22□□□□□ -1.25
TPM3-210ENST00000368530 HTN1P15515 57 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 RBMY1FQ15415 496 aaKnown RBP7.22□□□□□ -1.25
TPM3-210ENST00000368530 STHQ8IWL8 128 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 TMEM191AQ9H0A3 160 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 PHLDA3Q9Y5J5 127 aa7.22□□□□□ -1.25
TPM3-210ENST00000368530 IGHV1OR15-1A0A075B7D0 117 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 A8MTW9 85 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.26
TPM3-210ENST00000368530 ESDP10768 282 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 EVI2AP22794 236 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 CKS2P33552 79 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 SMIM15Q7Z3B0 74 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 NIT1Q86X76 327 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 RNF185Q96GF1 192 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 URB1-AS1Q96HZ7 61 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 PRELID3AQ96N28 172 aa7.21□□□□□ -1.26
TPM3-210ENST00000368530 IGHV4-4A0A075B6R2 117 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 IGHV3-16A0A0C4DH30 117 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 SMIM6P0DI80 62 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 RAB4AP20338 218 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 AMTP48728 403 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 CEMP1Q6PRD7 247 aaPredicted RBP7.2□□□□□ -1.26
TPM3-210ENST00000368530 ORMDL3Q8N138 153 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 SCRT2Q9NQ03 307 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
TPM3-210ENST00000368530 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 CBY3A6NI87 242 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 HSBP1O75506 76 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 GAS8-AS1O95177 125 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 NPYP01303 97 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 PRM2P04554 102 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 GATA1P15976 413 aaPredicted RBP7.19□□□□□ -1.26
TPM3-210ENST00000368530 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 TDRG1Q3Y452 100 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 DNLZQ5SXM8 178 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 CDPF1Q6NVV7 123 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 TP53TG1Q9Y2A0 90 aa7.19□□□□□ -1.26
TPM3-210ENST00000368530 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
TPM3-210ENST00000368530 NUPR2A6NF83 97 aa7.18□□□□□ -1.26
TPM3-210ENST00000368530 MGPP08493 103 aa7.18□□□□□ -1.26
TPM3-210ENST00000368530 Q6ZWC4 215 aa7.18□□□□□ -1.26
TPM3-210ENST00000368530 TRPT1Q86TN4 253 aaKnown RBP7.18□□□□□ -1.26
TPM3-210ENST00000368530 C14orf178Q8N769 122 aaPredicted RBP7.18□□□□□ -1.26
TPM3-210ENST00000368530 PRSS3P2Q8NHM4 247 aa7.18□□□□□ -1.26
TPM3-210ENST00000368530 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 INSP01308 110 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 LINC00614P0C842 121 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 RPL35AP18077 110 aaKnown RBP7.17□□□□□ -1.26
TPM3-210ENST00000368530 CMC4P56277 68 aaPredicted RBP7.17□□□□□ -1.26
TPM3-210ENST00000368530 FA2HQ7L5A8 372 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 LINC01587Q99440 93 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 JPT2Q9H910 190 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 NIT2Q9NQR4 276 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 IGHV3OR16-12A0A075B7B8 117 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 IFI27P40305 119 aaPredicted RBP7.17□□□□□ -1.26
TPM3-210ENST00000368530 KRTDAPP60985 99 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
TPM3-210ENST00000368530 RNF183Q96D59 192 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 AP1S3Q96PC3 154 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 DPH3P1Q9H4G8 78 aa7.17□□□□□ -1.26
TPM3-210ENST00000368530 A0A087WWL8 130 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 PCP4L1A6NKN8 68 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
TPM3-210ENST00000368530 NXPH4O95158 308 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 TNFRSF6BO95407 300 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 JOSD1Q15040 202 aaPredicted RBP7.16□□□□□ -1.26
TPM3-210ENST00000368530 DEFB135Q30KP9 77 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 TMEM208Q9BTX3 173 aa7.16□□□□□ -1.26
TPM3-210ENST00000368530 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.26
TPM3-210ENST00000368530 PCLOQ9Y6V0 5065 aa7.15□□□□□ -1.26
TPM3-210ENST00000368530 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms