RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR11H12B2RN74 326 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 PRAC2D3DTV9 90 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 CRIP2P52943 208 aaPredicted RBP8.72□□□□□ -1.01
USF1-201ENST00000368019 LYRM7Q5U5X0 104 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 WFDC3Q8IUB2 231 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 POM121L12Q8N7R1 296 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 NEXN-AS1Q8NBZ9 246 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 OR11H1Q8NG94 326 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 OR11H2Q8NH07 326 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 LINC00477Q96M19 166 aa8.72□□□□□ -1.01
USF1-201ENST00000368019 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 GAS8-AS1O95177 125 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 BRI3O95415 125 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 CLEC3BP05452 202 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 RPL24P83731 157 aaKnown RBP8.71□□□□□ -1.02
USF1-201ENST00000368019 PRB3Q04118 309 aaPredicted RBP8.71□□□□□ -1.02
USF1-201ENST00000368019 KLRD1Q13241 179 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 APRG1Q8IVJ8 170 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 SIRPDQ9H106 197 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 DPH3P1Q9H4G8 78 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 C11orf21Q9P2W6 132 aa8.71□□□□□ -1.02
USF1-201ENST00000368019 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 OVOL1O14753 267 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 TRGV3P03979 118 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 GATA1P15976 413 aaPredicted RBP8.7□□□□□ -1.02
USF1-201ENST00000368019 PROK1P58294 105 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 SUMO2P61956 95 aaKnown RBP8.7□□□□□ -1.02
USF1-201ENST00000368019 C15orf32Q32M92 178 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 TM4SF20Q53R12 229 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 SPANXN1Q5VSR9 72 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 MAPKAPK5-AS1Q8N8E1 139 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 LINC01006Q8NI28 216 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 HIST1H4GQ99525 98 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 VCX2Q9H322 139 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
USF1-201ENST00000368019 TRAV21A0A0B4J279 112 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 FAM223BA6NKX1 122 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 IGHV1-69P01742 117 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 UBE2E1P51965 193 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 FAM223AQ8IWN6 122 aa8.69□□□□□ -1.02
USF1-201ENST00000368019 H3BMG7 143 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 K7ERJ3 54 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 NXPH4O95158 308 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 IGHV3-23P01764 117 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 TCTEX1D4Q5JR98 221 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 GLMPQ8WWB7 406 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 TTTY13Q9BZ97 58 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 UFC1Q9Y3C8 167 aa8.68□□□□□ -1.02
USF1-201ENST00000368019 A0A1B0GV72 72 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 ATP6V0E1O15342 81 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 AZU1P20160 251 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 UBE2D1P51668 147 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 TCTAP57738 103 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 MTURNQ8N3F0 131 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 FAM19A4Q96LR4 140 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 C16orf95Q9H693 158 aa8.67□□□□□ -1.02
USF1-201ENST00000368019 IGHV4OR15-8A0A075B7B6 117 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 A0A087WW49 117 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 H3BUA1 57 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 LGALS1P09382 135 aaKnown RBP8.66□□□□□ -1.02
USF1-201ENST00000368019 ASIPP42127 132 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 HERVK_113P61574 105 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 WFDC2Q14508 124 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 C19orf54Q5BKX5 351 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 Q6ZSV7 163 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 RNF182Q8N6D2 247 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 BAALCQ8WXS3 180 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 RASL10AQ92737 203 aa8.66□□□□□ -1.02
USF1-201ENST00000368019 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
USF1-201ENST00000368019 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
USF1-201ENST00000368019 H3BVH4 76 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 M0QXV9 152 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 PPIFP30405 207 aaKnown RBP8.65□□□□□ -1.02
USF1-201ENST00000368019 ATP5G2Q06055 141 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 ECSCRQ19T08 205 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 MORN3Q6PF18 240 aaPredicted RBP8.65□□□□□ -1.02
USF1-201ENST00000368019 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 CLEC19AQ6UXS0 136 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 TMEM141Q96I45 108 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 SPAG8Q99932 426 aaPredicted RBP8.65□□□□□ -1.02
USF1-201ENST00000368019 C1QTNF4Q9BXJ3 329 aa8.65□□□□□ -1.02
USF1-201ENST00000368019 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
USF1-201ENST00000368019 NDUFA4O00483 81 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 SOCS3O14543 225 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 PRB4P10163 310 aaPredicted RBP8.64□□□□□ -1.03
USF1-201ENST00000368019 UBE2D3P61077 147 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 UBE2D2P62837 147 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 CFAP126Q5VTH2 177 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 C16orf92Q96LL3 132 aa8.64□□□□□ -1.03
USF1-201ENST00000368019 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms