RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 LINC01559Q495D7 138 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 FAM74A4Q5TZK3 123 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 UFSP1Q6NVU6 142 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 ZFP82Q8N141 532 aa9.88□□□□□ -0.83
CTSD-202ENST00000367196 ARPC5O15511 151 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
CTSD-202ENST00000367196 AKR1C3P42330 323 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
CTSD-202ENST00000367196 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 CHCHD7Q9BUK0 85 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 FAT1Q14517 4588 aa9.87□□□□□ -0.83
CTSD-202ENST00000367196 TRBV10-1A0A0K0K1A3 114 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 M0R381 172 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 LTAP01374 205 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 ELOBQ15370 118 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 ZNF674Q2M3X9 581 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 SAMD10Q9BYL1 202 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 JPT2Q9H910 190 aa9.86□□□□□ -0.83
CTSD-202ENST00000367196 GRIFINA4D1Z8 144 aa9.85□□□□□ -0.83
CTSD-202ENST00000367196 S100A9P06702 114 aaKnown RBP9.85□□□□□ -0.83
CTSD-202ENST00000367196 CRIP1P50238 77 aa9.85□□□□□ -0.83
CTSD-202ENST00000367196 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
CTSD-202ENST00000367196 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
CTSD-202ENST00000367196 TCTE3Q8IZS6 198 aa9.85□□□□□ -0.83
CTSD-202ENST00000367196 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
CTSD-202ENST00000367196 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
CTSD-202ENST00000367196 A0A087WX48 190 aa9.84□□□□□ -0.83
CTSD-202ENST00000367196 UMAD1C9J7I0 102 aa9.84□□□□□ -0.83
CTSD-202ENST00000367196 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.84□□□□□ -0.83
CTSD-202ENST00000367196 A0A087WWL8 130 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 TMSB15BA0A087X1C1 80 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 G3V3Q6 166 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 HAMPP81172 84 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 ZNF345Q14585 488 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 NIT1Q86X76 327 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 Q8N3U1 123 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 Q8N976 141 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 CYTL1Q9NRR1 136 aa9.83□□□□□ -0.84
CTSD-202ENST00000367196 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
CTSD-202ENST00000367196 CXCL1P09341 107 aa9.82□□□□□ -0.84
CTSD-202ENST00000367196 Q0VG73 95 aa9.82□□□□□ -0.84
CTSD-202ENST00000367196 IGKV2D-24A0A075B6R9 120 aa9.81□□□□□ -0.84
CTSD-202ENST00000367196 LECT2O14960 151 aa9.81□□□□□ -0.84
CTSD-202ENST00000367196 PAGE4O60829 102 aa9.81□□□□□ -0.84
CTSD-202ENST00000367196 PLA2G1BP04054 148 aaKnown RBP9.81□□□□□ -0.84
CTSD-202ENST00000367196 PKIAP61925 76 aa9.81□□□□□ -0.84
CTSD-202ENST00000367196 Q9UF83 564 aa9.81□□□□□ -0.84
CTSD-202ENST00000367196 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
CTSD-202ENST00000367196 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.8□□□□□ -0.84
CTSD-202ENST00000367196 SMLR1H3BR10 107 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 RAB4BP61018 213 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 UBE2D3P61077 147 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 UBE2D2P62837 147 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 EIF5AP63241 154 aaKnown RBP9.8□□□□□ -0.84
CTSD-202ENST00000367196 WFDC2Q14508 124 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 ZNF56Q15929 161 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 Q6ZSA8 131 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 KCNRGQ8N5I3 272 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 SFT2D1Q8WV19 159 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
CTSD-202ENST00000367196 KANTRA0A1W2PQU2 76 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 CRPP02741 224 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 MBD3L1Q8WWY6 194 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 BAALCQ8WXS3 180 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 ZNF471Q9BX82 626 aaPredicted RBP9.79□□□□□ -0.84
CTSD-202ENST00000367196 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
CTSD-202ENST00000367196 A0A0D9SG52 128 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 RBFOX3A6NFN3 312 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 SPANXN1Q5VSR9 72 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 BAGE2Q86Y30 109 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 VPS13BQ7Z7G8 4022 aa9.78□□□□□ -0.84
CTSD-202ENST00000367196 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.84
CTSD-202ENST00000367196 HERC1Q15751 4861 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 TRBV6-8A0A0A6YYG3 113 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 SCO2A0A1W2PP80 73 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 HMSDA8MTL9 139 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 TMEM262E9PQX1 116 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 TMEM97Q5BJF2 176 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 ATRAIDQ6UW56 229 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
CTSD-202ENST00000367196 A0A1B0GV50 99 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 BCL2L11O43521 198 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 SNAI2O43623 268 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 H2AFB1P0C5Y9 115 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 OR5AL1P0C617 328 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 LINC00528Q8N1L1 170 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 MLST8Q9BVC4 326 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
CTSD-202ENST00000367196 F5H697 171 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 J3QL48 77 aa9.75□□□□□ -0.85
CTSD-202ENST00000367196 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms