RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 CKS2P33552 79 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
CCDC7-203ENST00000362006 Q6ZTI0 123 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 ORMDL3Q8N138 153 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 U3KQK5 164 aa12.92□□□□□ -0.34
CCDC7-203ENST00000362006 EMP1P54849 157 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 CFAP126Q5VTH2 177 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 ALKBH7Q9BT30 221 aaPredicted RBP12.91□□□□□ -0.34
CCDC7-203ENST00000362006 A0A087WWL8 130 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 MGPP08493 103 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 SRIP30626 198 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 LINC00315P59091 139 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 ZFP2Q6ZN57 461 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 SBSPONQ8IVN8 264 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
CCDC7-203ENST00000362006 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.34
CCDC7-203ENST00000362006 SAMD10Q9BYL1 202 aa12.9□□□□□ -0.34
CCDC7-203ENST00000362006 TMA7Q9Y2S6 64 aaKnown RBP12.9□□□□□ -0.34
CCDC7-203ENST00000362006 TRAV4A0A0B4J268 109 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 D6R8Y8 96 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 LINC00612Q8N6U2 182 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 F5H697 171 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 PPP1R17O96001 155 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 MRAPQ8TCY5 172 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
CCDC7-203ENST00000362006 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 GAGE12BA1L429 117 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 GAGE7O76087 117 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 GAGE12FP0CL80 117 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 GAGE12GP0CL81 117 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 GAGE12IP0CL82 117 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 OR10J3Q5JRS4 329 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 UFSP1Q6NVU6 142 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 ZNF56Q15929 161 aa12.88□□□□□ -0.35
CCDC7-203ENST00000362006 Q0VG73 95 aa12.87□□□□□ -0.35
CCDC7-203ENST00000362006 FAM222AQ5U5X8 452 aa12.87□□□□□ -0.35
CCDC7-203ENST00000362006 RETNQ9HD89 108 aa12.87□□□□□ -0.35
CCDC7-203ENST00000362006 DKK2Q9UBU2 259 aa12.87□□□□□ -0.35
CCDC7-203ENST00000362006 H7C1H1 209 aa12.86□□□□□ -0.35
CCDC7-203ENST00000362006 SPART-AS1P0CW21 52 aa12.86□□□□□ -0.35
CCDC7-203ENST00000362006 C11orf68Q9H3H3 251 aaKnown RBP12.86□□□□□ -0.35
CCDC7-203ENST00000362006 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
CCDC7-203ENST00000362006 NBEAL2Q6ZNJ1 2754 aa12.86□□□□□ -0.35
CCDC7-203ENST00000362006 S100A6P06703 90 aa12.86□□□□□ -0.35
CCDC7-203ENST00000362006 NACAE9PAV3 2078 aa12.85□□□□□ -0.35
CCDC7-203ENST00000362006 SUMO4Q6EEV6 95 aa12.85□□□□□ -0.35
CCDC7-203ENST00000362006 C18orf32Q8TCD1 76 aa12.85□□□□□ -0.35
CCDC7-203ENST00000362006 SMKR1H3BMG3 65 aa12.85□□□□□ -0.35
CCDC7-203ENST00000362006 ZMAT4Q9H898 229 aa12.85□□□□□ -0.35
CCDC7-203ENST00000362006 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 DEFB4AO15263 64 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 NCR2O95944 276 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 DEFB130BP0DP73 79 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 DEFB130AP0DP74 79 aa12.84□□□□□ -0.35
CCDC7-203ENST00000362006 IGHV3-53P01767 116 aa12.83□□□□□ -0.35
CCDC7-203ENST00000362006 NDUFA6P56556 154 aa12.83□□□□□ -0.35
CCDC7-203ENST00000362006 ZNF479Q96JC4 524 aa12.83□□□□□ -0.35
CCDC7-203ENST00000362006 B9D2Q9BPU9 175 aa12.83□□□□□ -0.35
CCDC7-203ENST00000362006 IGHV3-73A0A0B4J1V6 119 aa12.83□□□□□ -0.36
CCDC7-203ENST00000362006 NPYP01303 97 aa12.83□□□□□ -0.36
CCDC7-203ENST00000362006 COA6Q5JTJ3 125 aaKnown RBP12.83□□□□□ -0.36
CCDC7-203ENST00000362006 BAGE3Q86Y29 109 aa12.83□□□□□ -0.36
CCDC7-203ENST00000362006 NRACQ8N912 160 aa12.83□□□□□ -0.36
CCDC7-203ENST00000362006 M0QY20 66 aa12.82□□□□□ -0.36
CCDC7-203ENST00000362006 DAD1P61803 113 aa12.82□□□□□ -0.36
CCDC7-203ENST00000362006 C20orf78Q9BR46 151 aa12.82□□□□□ -0.36
CCDC7-203ENST00000362006 MAP1LC3AQ9H492 121 aa12.82□□□□□ -0.36
CCDC7-203ENST00000362006 PRSS47A8MTI9 375 aa12.82□□□□□ -0.36
CCDC7-203ENST00000362006 DNHD1Q96M86 4753 aa12.81□□□□□ -0.36
CCDC7-203ENST00000362006 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
CCDC7-203ENST00000362006 NIT2Q9NQR4 276 aa12.81□□□□□ -0.36
CCDC7-203ENST00000362006 GAS8-AS1O95177 125 aa12.8□□□□□ -0.36
CCDC7-203ENST00000362006 TRBV6-5A0A0K0K1A5 114 aa12.8□□□□□ -0.36
CCDC7-203ENST00000362006 TRGV4A0A0C4DH28 118 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 IQCJQ1A5X6 159 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 PRSS3P2Q8NHM4 247 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 DNAJC30Q96LL9 226 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 ST20Q9HBF5 79 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 CELA1Q9UNI1 258 aa12.79□□□□□ -0.36
CCDC7-203ENST00000362006 SUMO2P61956 95 aaKnown RBP12.79□□□□□ -0.36
CCDC7-203ENST00000362006 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
CCDC7-203ENST00000362006 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
CCDC7-203ENST00000362006 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
CCDC7-203ENST00000362006 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms