RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 LYZL6O75951 148 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 IGLV1-44P01699 117 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 BAALC-AS2P0C853 105 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 Q0VFX4 171 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 RNF182Q8N6D2 247 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 CCL13Q99616 98 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 TTTY12Q9BZ98 90 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 SLC25A15Q9Y619 301 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 SMAD5-AS1Q9Y6J3 95 aa8.67□□□□□ -1.02
CNOT4-203ENST00000361528 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
CNOT4-203ENST00000361528 BEAN1Q3B7T3 259 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 LINC01561Q8N1V8 128 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 VSIG2Q96IQ7 327 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 C16orf92Q96LL3 132 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 TMEM178BH3BS89 294 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 DEFB119Q8N690 84 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
CNOT4-203ENST00000361528 DNAL4O96015 105 aa8.65□□□□□ -1.02
CNOT4-203ENST00000361528 SPINK14Q6IE38 97 aa8.65□□□□□ -1.02
CNOT4-203ENST00000361528 GFRALQ6UXV0 394 aa8.65□□□□□ -1.02
CNOT4-203ENST00000361528 COL6A3P12111 3177 aa8.65□□□□□ -1.02
CNOT4-203ENST00000361528 SDK2Q58EX2 2172 aa8.65□□□□□ -1.02
CNOT4-203ENST00000361528 MGPP08493 103 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 IGHV3-30-3P0DP02 117 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 RNF5Q99942 180 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 UBE2D4Q9Y2X8 147 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 LENEPQ9Y5L5 61 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 F5P12259 2224 aa8.65□□□□□ -1.03
CNOT4-203ENST00000361528 KNL1Q8NG31 2342 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 IGHV1-18A0A0C4DH31 117 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1BA6NDE4 496 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1EA6NEQ0 496 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 PRAC2D3DTV9 90 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 M0R1W7 72 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1DP0C7P1 496 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1A1P0DJD3 496 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1CP0DJD4 496 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RBMY1FQ15415 496 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 C6orf226Q5I0X4 101 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 ASXL3Q9C0F0 2248 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 BCE1O60756 84 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
CNOT4-203ENST00000361528 FAM27E3Q08E93 113 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 ADAMTSL4-AS1Q5T5F5 129 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 C9orf47Q6ZRZ4 202 aa8.64□□□□□ -1.03
CNOT4-203ENST00000361528 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
CNOT4-203ENST00000361528 ATP5EP2Q5VTU8 51 aa8.63□□□□□ -1.03
CNOT4-203ENST00000361528 PRO3102Q9H379 93 aa8.63□□□□□ -1.03
CNOT4-203ENST00000361528 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
CNOT4-203ENST00000361528 PHLDA3Q9Y5J5 127 aa8.63□□□□□ -1.03
CNOT4-203ENST00000361528 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
CNOT4-203ENST00000361528 TRIOO75962 3097 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 CCL3L1P16619 93 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 IGFL4Q6B9Z1 124 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 NBR2O15453 112 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 DEFB108BQ8NET1 73 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 NUP37Q8NFH4 326 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 PRR14LQ5THK1 2151 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 DSCAMO60469 2012 aa8.62□□□□□ -1.03
CNOT4-203ENST00000361528 IGHV1-58A0A0C4DH39 117 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 SPRY3O43610 288 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 AVPP01185 164 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 XCL1P47992 114 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 Q6ZSV7 163 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 FAM223AQ8IWN6 122 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 OVOL2Q9BRP0 275 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 SVILO95425 2214 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 NXPH4O95158 308 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 S100A4P26447 101 aaKnown RBP8.61□□□□□ -1.03
CNOT4-203ENST00000361528 S100A7L2Q5SY68 101 aa8.61□□□□□ -1.03
CNOT4-203ENST00000361528 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-203ENST00000361528 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 GHRHP01286 108 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 WFDC11Q8NEX6 87 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 PI4KAP42356 2102 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 A0A087WVE0 104 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 IGHV3-72A0A0B4J1Y9 119 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 TRAV12-3A0A0B4J271 114 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 ATP5EP56381 51 aaPredicted RBP8.6□□□□□ -1.03
CNOT4-203ENST00000361528 FANCD2OSQ96PS1 177 aa8.6□□□□□ -1.03
CNOT4-203ENST00000361528 TRAV21A0A0B4J279 112 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 H7BZZ5 65 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 Q6ZS52 159 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 BRK1Q8WUW1 75 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 DOCK10Q96BY6 2186 aa8.59□□□□□ -1.03
CNOT4-203ENST00000361528 IGLV3-9A0A075B6K5 115 aa8.58□□□□□ -1.04
CNOT4-203ENST00000361528 A0A0J9YXV3 536 aa8.58□□□□□ -1.04
CNOT4-203ENST00000361528 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
CNOT4-203ENST00000361528 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
CNOT4-203ENST00000361528 KIF25-AS1Q9Y6Z4 181 aa8.58□□□□□ -1.04
CNOT4-203ENST00000361528 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
CNOT4-203ENST00000361528 RNASE4P34096 147 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms