RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 A0A0G2JRQ6 117 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 CRYBA4P53673 196 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 HHLA3Q9XRX5 114 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 WT1-ASQ06250 92 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 TRAV4A0A0B4J268 109 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 A0A0J9YY99 117 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 Q6ZQT7 251 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 C12orf74Q32Q52 190 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 TRAV12-1A0A0B4J245 112 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 MGAM2Q2M2H8 2515 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 WDR86Q86TI4 376 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 F8W735 103 aaPredicted RBP7.6□□□□□ -1.19
CUX1-203ENST00000360264 PRR30Q53SZ7 412 aaPredicted RBP7.6□□□□□ -1.19
CUX1-203ENST00000360264 DEFB105AQ8NG35 78 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 IGHG2P01859 326 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 SND1-IT1Q9HBX3 110 aa7.6□□□□□ -1.19
CUX1-203ENST00000360264 DYNAPQ8N1N2 210 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 JMJD7-PLA2G4BH0Y9G9 81 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 K7EMT4 169 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 SPATA25Q9BR10 227 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 IGLL5B9A064 214 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 C9orf47Q6ZRZ4 202 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 Q9HAA7 133 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 HIST2H2BCQ6DN03 193 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 MRPL35Q9NZE8 188 aaKnown RBP7.59□□□□□ -1.19
CUX1-203ENST00000360264 A4D1N5 150 aa7.59□□□□□ -1.19
CUX1-203ENST00000360264 PROP1O75360 226 aa7.59□□□□□ -1.2
CUX1-203ENST00000360264 NREPQ16612 68 aa7.59□□□□□ -1.2
CUX1-203ENST00000360264 GPHB5Q86YW7 130 aa7.59□□□□□ -1.2
CUX1-203ENST00000360264 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 FAM215AQ9Y5M1 114 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 CFC1BP0CG36 223 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 CFC1P0CG37 223 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 ZNRD1Q9P1U0 126 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 C5orf24Q7Z6I8 188 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 PROK2Q9HC23 129 aa7.58□□□□□ -1.2
CUX1-203ENST00000360264 LY6G6EA0A0G2JKS1 128 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 SLURP1P55000 103 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 FAM120AOSQ5T036 256 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 ZNF491Q8N8L2 437 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 U3KQA8 63 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 THSD7BQ9C0I4 1608 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 TINCRA0A1B0GVN0 87 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 DEFB112Q30KQ8 113 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 ADCYAP1P18509 176 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 ZFP2Q6ZN57 461 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 Q6ZR03 302 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 COX7B2Q8TF08 81 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 CYYR1Q96J86 154 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 CLPSL1A2RUU4 121 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 MED14OSP0DP75 135 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 C15orf53Q8NAA6 179 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 PIP4P1Q86T03 277 aa7.57□□□□□ -1.2
CUX1-203ENST00000360264 PRR31Q5SQ13 230 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 ZNF581Q9P0T4 197 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 DIRC1Q969H9 104 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 CENPVL3A0A0U1RRI6 287 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 PRR20EP86478 221 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 PRR20CP86479 221 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 PRR20DP86480 221 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 PRR20BP86481 221 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 PRR20AP86496 221 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 IGHV7-81A0A0B4J1V7 117 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 ATOX1O00244 68 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 DAZAP2Q15038 168 aaPredicted RBP7.56□□□□□ -1.2
CUX1-203ENST00000360264 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 KIR2DL5BA0A0G2JN68 375 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 KIR2DL5BA0A0G2JPC4 375 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 KIR2DL5AQ8N109 375 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 K7EIM0 57 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 IGHV4-59P01825 116 aa7.56□□□□□ -1.2
CUX1-203ENST00000360264 A0A0B4J2C4 111 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 Q71RC1 249 aaPredicted RBP7.55□□□□□ -1.2
CUX1-203ENST00000360264 ZNF747Q9BV97 191 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 TMEM256-PLSCR3K7ERE1 68 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 IGLL1P15814 213 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
CUX1-203ENST00000360264 DEFB125Q8N687 156 aa7.55□□□□□ -1.2
CUX1-203ENST00000360264 GNRH2O43555 120 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 TMEM89A2RUT3 159 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 IGLV3-1P01715 115 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 ZNF726P1Q15940 193 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 C2orf70A6NJV1 201 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 SEM1Q6ZVN7 128 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 TRBV10-1A0A0K0K1A3 114 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 K7ERJ3 54 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 FHL1Q13642 323 aa7.54□□□□□ -1.2
CUX1-203ENST00000360264 HIGD2BQ4VC39 106 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 Q8NFD4 153 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 C10orf91Q5T1B1 145 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 WFDC9Q8NEX5 89 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 AMTNQ6UX39 209 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 C1orf147Q96MC9 270 aaPredicted RBP7.53□□□□□ -1.2
CUX1-203ENST00000360264 CCL25O15444 150 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
CUX1-203ENST00000360264 H3BMG7 143 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms