RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 TOMM6Q96B49 74 aa15.33■□□□□ 0.05
COL13A1-202ENST00000357811 PRORYQ9H606 182 aa15.33■□□□□ 0.05
COL13A1-202ENST00000357811 HTN1P15515 57 aa15.33■□□□□ 0.04
COL13A1-202ENST00000357811 CRIP2P52943 208 aaPredicted RBP15.33■□□□□ 0.04
COL13A1-202ENST00000357811 NDUFS8O00217 210 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 NEXN-AS1Q8NBZ9 246 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF256Q9Y2P7 627 aaPredicted RBP15.32■□□□□ 0.04
COL13A1-202ENST00000357811 CCDC168Q8NDH2 2452 aa15.32■□□□□ 0.04
COL13A1-202ENST00000357811 HLA-DRB4P13762 266 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 WFDC2Q14508 124 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 HIST2H2BDQ6DRA6 164 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 HLA-DRB4X5D2U9 266 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 CKS1BP61024 79 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 TP53TG1Q9Y2A0 90 aa15.31■□□□□ 0.04
COL13A1-202ENST00000357811 SH2D6Q7Z4S9 175 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 MDFICQ9P1T7 246 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 C12orf74Q32Q52 190 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 TM2D2Q9BX73 214 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 H3BMG7 143 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 FAM19A4Q96LR4 140 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 C20orf78Q9BR46 151 aa15.3■□□□□ 0.04
COL13A1-202ENST00000357811 NF1P21359 2839 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 IGLV1-40P01703 118 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SLC25A16P16260 332 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 DEFB112Q30KQ8 113 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SUMO4Q6EEV6 95 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SCGB1D4Q6XE38 83 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 C2CD3Q4AC94 2353 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 SPINK13Q1W4C9 94 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF479Q96JC4 524 aa15.29■□□□□ 0.04
COL13A1-202ENST00000357811 TRAV26-1A0A087WT03 109 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 MYMXA0A1B0GTQ4 84 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 IGLL5B9A064 214 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 ETDBQ3ZM63 59 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 DCANP1Q8TF63 244 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 PLEKHB2Q96CS7 222 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 ZNF815PA8K554 130 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 SYNJ2BPP57105 145 aa15.28■□□□□ 0.04
COL13A1-202ENST00000357811 OPRPNQ99935 248 aaPredicted RBP15.28■□□□□ 0.04
COL13A1-202ENST00000357811 LINC00315P59091 139 aa15.27■□□□□ 0.04
COL13A1-202ENST00000357811 NACAE9PAV3 2078 aa15.27■□□□□ 0.04
COL13A1-202ENST00000357811 LGALS1P09382 135 aaKnown RBP15.27■□□□□ 0.03
COL13A1-202ENST00000357811 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 TMEM238LA0A1B0GVL6 79 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 PRM2P04554 102 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 SCGB1A1P11684 91 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 TSHBP01222 138 aa15.26■□□□□ 0.03
COL13A1-202ENST00000357811 C11orf86A6NJI1 115 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 J3QR89 54 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CRYGDP07320 174 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 ZNF56Q15929 161 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 KIF25-AS1Q9Y6Z4 181 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CHD6Q8TD26 2715 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 SDHAF1A6NFY7 115 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 KLLNB2CW77 178 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 ID1P41134 155 aa15.25■□□□□ 0.03
COL13A1-202ENST00000357811 CRYBA4P53673 196 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 SRSF9Q13242 221 aaKnown RBP eCLIP15.24■□□□□ 0.03
COL13A1-202ENST00000357811 ZFP2Q6ZN57 461 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 IGHV3-73A0A0B4J1V6 119 aa15.24■□□□□ 0.03
COL13A1-202ENST00000357811 TRBV7-3A0A075B6L6 115 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 B4DSR2 109 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 H3BUA1 57 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 TMEM170BQ5T4T1 132 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 Q8N1Y9 231 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 NIPBLQ6KC79 2804 aaeCLIP15.23■□□□□ 0.03
COL13A1-202ENST00000357811 TGFAP01135 160 aa15.23■□□□□ 0.03
COL13A1-202ENST00000357811 SPAG8Q99932 426 aaPredicted RBP15.23■□□□□ 0.03
COL13A1-202ENST00000357811 IGHV3-64A0A075B6Q5 118 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 E9PLD3 99 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 PSMB8P28062 276 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 INSL3P51460 131 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 CFHR3Q02985 330 aa15.22■□□□□ 0.03
COL13A1-202ENST00000357811 SPANXB1Q9NS25 103 aaPredicted RBP15.22■□□□□ 0.03
COL13A1-202ENST00000357811 DEFB136Q30KP8 78 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 KIR2DL4Q99706 377 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 JMJD1CQ15652 2540 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 APOMO95445 188 aa15.21■□□□□ 0.03
COL13A1-202ENST00000357811 APRG1Q8IVJ8 170 aa15.21■□□□□ 0.02
COL13A1-202ENST00000357811 FOXI2Q6ZQN5 318 aa15.2■□□□□ 0.02
COL13A1-202ENST00000357811 DUX3Q96PT4 197 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 PGPEP1Q9NXJ5 209 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 PRRC2AP48634 2157 aaKnown RBP15.19■□□□□ 0.02
COL13A1-202ENST00000357811 IGLV4-69A0A075B6H9 119 aa15.19■□□□□ 0.02
COL13A1-202ENST00000357811 POLR2KP53803 58 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 MRPL16Q9NX20 251 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 PRB1P04280 392 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 C18orf65Q6ZTR6 163 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 GEMIN7Q9H840 131 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 BEX4Q9NWD9 120 aaPredicted RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGHV4OR15-8A0A075B7B6 117 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 A0A087WW49 117 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGIPA6NJ69 53 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 MED14OSP0DP75 135 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 TSPEAR-AS2P59090 65 aa15.18■□□□□ 0.02
COL13A1-202ENST00000357811 SNRPD3P62318 126 aaKnown RBP15.18■□□□□ 0.02
COL13A1-202ENST00000357811 IGHV3-16A0A0C4DH30 117 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 LINC01549A6NIU2 74 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms