RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 LINC01556Q5JQF7 62 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 CRYGBP07316 175 aa4.46□□□□□ -1.7
BRCA1-203ENST00000357654 DLEU1O43261 78 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 WT1P19544 449 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-203ENST00000357654 FAM236AA0A1B0GUQ0 79 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 FAM236BA0A1B0GV22 79 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 ZFAND3Q9H8U3 227 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 DOCK6Q96HP0 2047 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 F8VRH5 84 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 MDFIQ99750 246 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 A4D1N5 150 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 CXCL5P42830 114 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 AGPAT4-IT1Q9H0P7 198 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 MAP6D1Q9H9H5 199 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 F5P12259 2224 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 RITA1Q96K30 269 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 DOCK9Q9BZ29 2069 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 H0YGX0 51 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 TMEM256-PLSCR3K7ERE1 68 aa4.45□□□□□ -1.7
BRCA1-203ENST00000357654 B5MCH6 92 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 DAZAP2Q15038 168 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-203ENST00000357654 CLUHP3Q96NS8 147 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 CADP27708 2225 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 Q6ZTI0 123 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 DOCK7Q96N67 2140 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 NACAE9PAV3 2078 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 COL11A2P13942 1736 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-203ENST00000357654 K7EP34 96 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 MT-ATP8P03928 68 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 SPRNQ5BIV9 151 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 Q6ZR03 302 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 AKAP6Q13023 2319 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 ZDBF2Q9HCK1 2354 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 ZFC3H1O60293 1989 aaKnown RBP4.44□□□□□ -1.7
BRCA1-203ENST00000357654 H3BQ85 93 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 B3GALT5-AS1P59052 145 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 ATRAIDQ6UW56 229 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 DYSFO75923 2080 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 TRBV10-1A0A0K0K1A3 114 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 LOC100131303A0A0U1RQF7 123 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 C9orf118A6NHY6 69 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 U3KQK5 164 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 PSME4Q14997 1843 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 IGLV3-32A0A0A0MS00 114 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 C12orf74Q32Q52 190 aa4.44□□□□□ -1.7
BRCA1-203ENST00000357654 NUP214P35658 2090 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-203ENST00000357654 ADAMTSL1Q8N6G6 1762 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 IGLC7A0M8Q6 106 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 WT1-ASQ06250 92 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 Q8TCH9 128 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 MYOFQ9NZM1 2061 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 BRWD3Q6RI45 1802 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 C5orf56Q8N8D9 126 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 FAM215AQ9Y5M1 114 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 UFSP1Q6NVU6 142 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 Q6ZRM9 215 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 IMUPQ9GZP8 106 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 TP53TG3Q9ULZ0 132 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 TP53BP1Q12888 1972 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-203ENST00000357654 LOXL1Q08397 574 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-203ENST00000357654 J3QRE1 110 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
BRCA1-203ENST00000357654 KPRPQ5T749 579 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-203ENST00000357654 TRBV24-1A0A075B6N3 115 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 TEN1Q86WV5 123 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 KLHDC3Q9BQ90 382 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 F8W1H4 67 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 BRI3O95415 125 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 MPZP25189 248 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 CARHSP1Q9Y2V2 147 aaKnown RBP4.42□□□□□ -1.7
BRCA1-203ENST00000357654 TMEM14EPQ6UXP3 125 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 ZFAND2AQ8N6M9 145 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 UBE2V1Q13404 147 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 C11orf52Q96A22 123 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
BRCA1-203ENST00000357654 ANKRD36A6QL64 1941 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 IGHV7-81A0A0B4J1V7 117 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 LOC107984640A0A0U1RRK4 108 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 LINC01548A6NM66 108 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 C16orf54Q6UWD8 224 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 IGFL3Q6UXB1 125 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 Q6ZUT4 128 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 ARFGEF1Q9Y6D6 1849 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 SPTBN1Q01082 2364 aaKnown RBP4.42□□□□□ -1.7
BRCA1-203ENST00000357654 TRBV6-6A0A0A6YYG2 114 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 TRBV6-1A0A0K0K1D8 114 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 A0A1W2PPM0 123 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 C22orf34Q6ZV56 151 aa4.42□□□□□ -1.7
BRCA1-203ENST00000357654 BBC3Q96PG8 261 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-203ENST00000357654 COL6A6A6NMZ7 2263 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 FRMD6-AS1P0C7T7 363 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 ENHOQ6UWT2 76 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 WFDC10AQ9H1F0 79 aa4.41□□□□□ -1.7
BRCA1-203ENST00000357654 KIAA1217Q5T5P2 1943 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms