RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZNF56Q15929 161 aa7.71□□□□□ -1.17
SYNE1-203ENST00000354674 TMEM158Q8WZ71 300 aa7.71□□□□□ -1.17
SYNE1-203ENST00000354674 C17orf77Q96MU5 243 aa7.71□□□□□ -1.17
SYNE1-203ENST00000354674 PRSS22Q9GZN4 317 aa7.71□□□□□ -1.17
SYNE1-203ENST00000354674 HAX1O00165 279 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 TCRAP04437 139 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 SPXQ9BT56 116 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 IGKV1D-37A0A075B6S9 117 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 C19orf71A6NCJ1 209 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 DPM2O94777 84 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 TMEM75Q8N9X5 138 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 C8orf49Q96NF6 230 aa7.71□□□□□ -1.18
SYNE1-203ENST00000354674 M0R3E3 92 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 LY6G6DO95868 133 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 SRD5A1P18405 259 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 Q6ZS46 218 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 RASL10AQ92737 203 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 SRSF2Q01130 221 aaKnown RBP7.7□□□□□ -1.18
SYNE1-203ENST00000354674 CFHR3Q02985 330 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 PLEKHB2Q96CS7 222 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 SMR3AQ99954 134 aa7.7□□□□□ -1.18
SYNE1-203ENST00000354674 TRAV41A0A0B4J266 112 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 G3V318 75 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 RS1O15537 224 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-203ENST00000354674 CSPG4Q6UVK1 2322 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 CD7P09564 240 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 ECSCRQ19T08 205 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 Q8N2B8 174 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 TRAV26-2A0A0B4J265 109 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 SLC25A20O43772 301 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 C9orf153Q5TBE3 101 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 TRGV9Q99603 122 aa7.69□□□□□ -1.18
SYNE1-203ENST00000354674 MYMXA0A1B0GTQ4 84 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 F8W735 103 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-203ENST00000354674 H3BUA1 57 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 MYOZ3Q8TDC0 251 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 DUX3Q96PT4 197 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 ZNF492Q9P255 531 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 MYO9AB2RTY4 2548 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 TRAV25A0A0B4J276 109 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 ZNF702PQ9H963 129 aa7.68□□□□□ -1.18
SYNE1-203ENST00000354674 ZNF785A8K8V0 405 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 SPRY2O43597 315 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 IGLV1-40P01703 118 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 ZNF493Q6ZR52 646 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 Q86TA4 180 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 TRAV2A0A0B4J234 112 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 ZNF815PA8K554 130 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 CRIP1P50238 77 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 Q1RN00 199 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 IGFL4Q6B9Z1 124 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 Q8N1Y9 231 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 HIGD1AQ9Y241 93 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 TRBV7-3A0A075B6L6 115 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 FAM236AA0A1B0GUQ0 79 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 FAM236BA0A1B0GV22 79 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 LYZP61626 148 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 ESM1Q9NQ30 184 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 S4R3C0 116 aa7.67□□□□□ -1.18
SYNE1-203ENST00000354674 TRAV8-4A0A0B4J246 113 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 HRCT1Q6UXD1 115 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 LINC01587Q99440 93 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 LINC00527Q9UJ94 153 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 FAM223BA6NKX1 122 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 IGKV1-17P01599 117 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 MFAP4P55083 255 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 HERVK_113P63121 156 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 C4orf26Q17RF5 130 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 TMEM78Q5T7P6 136 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 FAM223AQ8IWN6 122 aa7.66□□□□□ -1.18
SYNE1-203ENST00000354674 TRGV11A0A075B6L2 103 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 TMEM89A2RUT3 159 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 ELANEP08246 267 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 Q8TAT8 98 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 ODF3Q96PU9 254 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 CUBNO60494 3623 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 IGLC6P0CF74 106 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
SYNE1-203ENST00000354674 IGHG4P01861 327 aa7.65□□□□□ -1.19
SYNE1-203ENST00000354674 LGALS1P09382 135 aaKnown RBP7.65□□□□□ -1.19
SYNE1-203ENST00000354674 TRBV7-1A0A0A6YYK4 115 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 NSUN5P1Q3KNT7 163 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 MRPL32Q9BYC8 188 aaKnown RBP7.64□□□□□ -1.19
SYNE1-203ENST00000354674 RBAKDNA6NC62 111 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 F5H768 121 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
SYNE1-203ENST00000354674 CTSGP08311 255 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 PSMB8P28062 276 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 HILS1P60008 231 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
SYNE1-203ENST00000354674 USMG5Q96IX5 58 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms