RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SDHAF1A6NFY7 115 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 E7EQL1 145 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 M0R2P5 195 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 VCYO14598 125 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 BRI3O95415 125 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 TSHBP01222 138 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 Q6Q795 121 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
BRCA1-201ENST00000352993 TNFRSF18Q9Y5U5 241 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 DMXL2Q8TDJ6 3036 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 F6UB75 175 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 M0QXV9 152 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 MRPL23Q16540 153 aaKnown RBP5.78□□□□□ -1.48
BRCA1-201ENST00000352993 VPREB3Q9UKI3 123 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 IGHV4-4A0A075B6R2 117 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 TMEM101Q96IK0 257 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 G3V318 75 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 LY6LH3BQJ8 138 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 ZNF883P0CG24 379 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 C9orf47Q6ZRZ4 202 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 NPBQ8NG41 125 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 LINC00527Q9UJ94 153 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 OTOGLQ3ZCN5 2332 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 IGHV1-69DA0A0B4J2H0 117 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 A0A0G2JNJ9 132 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 P0DMU3 169 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 FAM231AP0DMU4 169 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 FAM231CP0DMU5 169 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 UBE2E1P51965 193 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 Q9UFV3 132 aa5.77□□□□□ -1.49
BRCA1-201ENST00000352993 A0A0B4J2C4 111 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 A0A0J9YXV3 536 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 Q6ZSV7 163 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 SPANXA1Q9NS26 97 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 ZNF580Q9UK33 172 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 SPTA1P02549 2419 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 PIEZO2Q9H5I5 2752 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 COL6A6A6NMZ7 2263 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 LEPROTO15243 131 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 TMEM126AQ9H061 195 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 ZFAND3Q9H8U3 227 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 PTPRZ1P23471 2315 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-201ENST00000352993 PRRC2AP48634 2157 aaKnown RBP5.76□□□□□ -1.49
BRCA1-201ENST00000352993 IGHV7-81A0A0B4J1V7 117 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 H7C423 109 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 CDX4O14627 284 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-201ENST00000352993 EIF4EBP3O60516 100 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-201ENST00000352993 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 ZNF22P17026 224 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-201ENST00000352993 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 EEF1AKMT3Q96AZ1 226 aa5.76□□□□□ -1.49
BRCA1-201ENST00000352993 PIEZO1Q92508 2521 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 ATP6V0E1O15342 81 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 CD3EP07766 207 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 PRR30Q53SZ7 412 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-201ENST00000352993 GPHB5Q86YW7 130 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 LINC00477Q96M19 166 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 CSMD1Q96PZ7 3565 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 OOSP1A8MZH6 123 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 ZNF876PQ49A33 203 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 IGFL2Q6UWQ7 119 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 VMO1Q7Z5L0 202 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 DUX5Q96PT3 197 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 A0A0U1RRA0 63 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 LOC107984640A0A0U1RRK4 108 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 IGKV3-20P01619 116 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 RNASE13Q5GAN3 156 aaKnown RBP5.75□□□□□ -1.49
BRCA1-201ENST00000352993 TIMM21Q9BVV7 248 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 UBTD1Q9HAC8 227 aa5.75□□□□□ -1.49
BRCA1-201ENST00000352993 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 B9A039 149 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 C9orf139Q6ZV77 190 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 ZFAND2AQ8N6M9 145 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 MDFICQ9P1T7 246 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 SORL1Q92673 2214 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 CLPSL1A2RUU4 121 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 RNF223E7ERA6 249 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 ADGRG4Q8IZF6 3080 aa5.74□□□□□ -1.49
BRCA1-201ENST00000352993 TRBV30A0A0K0K1B3 111 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 TMEM223A0PJW6 202 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 ATP5J2P56134 94 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 LINC01560Q8TB33 94 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 KLK5Q9Y337 293 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-201ENST00000352993 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-201ENST00000352993 DAND5Q8N907 189 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 DEFB124Q8NES8 71 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 MRPL53Q96EL3 112 aaKnown RBP5.73□□□□□ -1.49
BRCA1-201ENST00000352993 CCDC140Q96MF4 163 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 AMELXQ99217 191 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 EDA2RQ9HAV5 297 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 BSNQ9UPA5 3926 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 H3BT86 120 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 OVOL1O14753 267 aa5.73□□□□□ -1.49
BRCA1-201ENST00000352993 RNASE3P12724 160 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 470.9 ms