RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 VMO1Q7Z5L0 202 aa11.3□□□□□ -0.6
TRAF3-202ENST00000351691 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
TRAF3-202ENST00000351691 HIVEP3Q5T1R4 2406 aa11.3□□□□□ -0.6
TRAF3-202ENST00000351691 J3QQQ9 107 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 TGFAP01135 160 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 NDPQ00604 133 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 TRPT1Q86TN4 253 aaKnown RBP11.29□□□□□ -0.6
TRAF3-202ENST00000351691 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 TMEM126AQ9H061 195 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 IGHV4OR15-8A0A075B7B6 117 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 A0A087WW49 117 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 A4D1N5 150 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 LGALS9O00182 355 aa11.29□□□□□ -0.6
TRAF3-202ENST00000351691 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 FAM240AA0A1B0GVK7 77 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 LGALS3P17931 250 aaKnown RBP11.28□□□□□ -0.6
TRAF3-202ENST00000351691 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 FAM159AQ6UWV7 190 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 A0A0J9YX75 114 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 CLPSL1A2RUU4 121 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 LEPROTO15243 131 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
TRAF3-202ENST00000351691 LY6HO94772 140 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 USP24Q9UPU5 2620 aa11.28□□□□□ -0.6
TRAF3-202ENST00000351691 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 H3BMM0 161 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 NXPH4O95158 308 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 CDSNQ15517 529 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-202ENST00000351691 FAM110DQ8TAY7 271 aaPredicted RBP11.27□□□□□ -0.61
TRAF3-202ENST00000351691 LINC00477Q96M19 166 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 U3KQE9 123 aa11.27□□□□□ -0.61
TRAF3-202ENST00000351691 CACNA1BQ00975 2339 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 PRR9Q5T870 116 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 SIRPDQ9H106 197 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
TRAF3-202ENST00000351691 H3BT86 120 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 MGPP08493 103 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
TRAF3-202ENST00000351691 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 IGSF10Q6WRI0 2623 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 SDHAF1A6NFY7 115 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
TRAF3-202ENST00000351691 MEIG1Q5JSS6 88 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 Q6ZQT7 251 aa11.25□□□□□ -0.61
TRAF3-202ENST00000351691 VCYO14598 125 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 ZNRF2Q8NHG8 242 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 ITLN2Q8WWU7 325 aaPredicted RBP11.24□□□□□ -0.61
TRAF3-202ENST00000351691 METTL26Q96S19 204 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
TRAF3-202ENST00000351691 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 TRBV7-7A0A0K0K1E9 115 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
TRAF3-202ENST00000351691 IGHV7-81A0A0B4J1V7 117 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 TEX49A0A1B0GTD5 131 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 M0R2P5 195 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 IGHV1-69P01742 117 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 MUSTN1Q8IVN3 82 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 ARL3P36405 182 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 UBE2E1P51965 193 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 Q8N9W7 124 aa11.23□□□□□ -0.61
TRAF3-202ENST00000351691 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
TRAF3-202ENST00000351691 OVOL1O14753 267 aa11.22□□□□□ -0.61
TRAF3-202ENST00000351691 ZFP36P26651 326 aaKnown RBP11.22□□□□□ -0.61
TRAF3-202ENST00000351691 APRG1Q8IVJ8 170 aa11.22□□□□□ -0.61
TRAF3-202ENST00000351691 EMP1P54849 157 aa11.21□□□□□ -0.61
TRAF3-202ENST00000351691 LINC00315P59091 139 aa11.21□□□□□ -0.61
TRAF3-202ENST00000351691 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.62
TRAF3-202ENST00000351691 Q1RN00 199 aa11.21□□□□□ -0.62
TRAF3-202ENST00000351691 C16orf92Q96LL3 132 aa11.21□□□□□ -0.62
TRAF3-202ENST00000351691 CFAP46Q8IYW2 2715 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 ELANEP08246 267 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 IMUPQ9GZP8 106 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 TRBV7-1A0A0A6YYK4 115 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 IGHV3-66A0A0C4DH42 116 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 TRBV27A0A0K0K1C4 114 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 TRIAP1O43715 76 aa11.2□□□□□ -0.62
TRAF3-202ENST00000351691 ZFYVE26Q68DK2 2539 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 LRBAP50851 2863 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 BRI3O95415 125 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
TRAF3-202ENST00000351691 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 LINC01587Q99440 93 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
TRAF3-202ENST00000351691 H7C423 109 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms