RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.52
COG3-201ENST00000349995 RHOHQ15669 191 aa11.77□□□□□ -0.52
COG3-201ENST00000349995 MLST8Q9BVC4 326 aa11.77□□□□□ -0.52
COG3-201ENST00000349995 THBDP07204 575 aa11.77□□□□□ -0.53
COG3-201ENST00000349995 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
COG3-201ENST00000349995 BAALCQ8WXS3 180 aa11.77□□□□□ -0.53
COG3-201ENST00000349995 OVOL2Q9BRP0 275 aa11.77□□□□□ -0.53
COG3-201ENST00000349995 SEM1Q6ZVN7 128 aa11.77□□□□□ -0.53
COG3-201ENST00000349995 IGLV3-9A0A075B6K5 115 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 LOC107984640A0A0U1RRK4 108 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 NBL1P41271 181 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 LINC01587Q99440 93 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 SONP18583 2426 aaKnown RBP11.76□□□□□ -0.53
COG3-201ENST00000349995 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 E7EUB6 86 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 LGALS9O00182 355 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 C10orf105Q8TEF2 133 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 AGPAT4-IT1Q9H0P7 198 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 VPREB3Q9UKI3 123 aa11.76□□□□□ -0.53
COG3-201ENST00000349995 NDUFC2O95298 119 aa11.75□□□□□ -0.53
COG3-201ENST00000349995 PROP1O75360 226 aa11.75□□□□□ -0.53
COG3-201ENST00000349995 TLN2Q9Y4G6 2542 aa11.75□□□□□ -0.53
COG3-201ENST00000349995 JPT2Q9H910 190 aa11.75□□□□□ -0.53
COG3-201ENST00000349995 ARHGAP32A7KAX9 2087 aa11.75□□□□□ -0.53
COG3-201ENST00000349995 GATA4P43694 442 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 CCL19Q99731 98 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 GRNP28799 593 aaKnown RBP11.74□□□□□ -0.53
COG3-201ENST00000349995 PFN2P35080 140 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 UBE2E1P51965 193 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 C20orf197Q8N268 126 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 PIFOQ8TCI5 191 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 MSMPQ1L6U9 139 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 V9GYY9 64 aa11.74□□□□□ -0.53
COG3-201ENST00000349995 BUB1B-PAK6H3BSN5 160 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 RNF152Q8N8N0 203 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 EML5Q05BV3 1969 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 GNLYP22749 145 aa11.73□□□□□ -0.53
COG3-201ENST00000349995 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
COG3-201ENST00000349995 KLK5Q9Y337 293 aaPredicted RBP11.72□□□□□ -0.53
COG3-201ENST00000349995 GNRH2O43555 120 aa11.72□□□□□ -0.53
COG3-201ENST00000349995 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
COG3-201ENST00000349995 NAV2Q8IVL1 2488 aa11.72□□□□□ -0.53
COG3-201ENST00000349995 CENPVL3A0A0U1RRI6 287 aa11.72□□□□□ -0.53
COG3-201ENST00000349995 COX6B1P14854 86 aa11.72□□□□□ -0.53
COG3-201ENST00000349995 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
COG3-201ENST00000349995 PRB2P02812 416 aaPredicted RBP11.71□□□□□ -0.53
COG3-201ENST00000349995 ITLN2Q8WWU7 325 aaPredicted RBP11.71□□□□□ -0.53
COG3-201ENST00000349995 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
COG3-201ENST00000349995 IGHV3-38A0A0C4DH36 116 aa11.71□□□□□ -0.54
COG3-201ENST00000349995 I3L3M4 83 aa11.7□□□□□ -0.54
COG3-201ENST00000349995 LOXP28300 417 aaPredicted RBP11.7□□□□□ -0.54
COG3-201ENST00000349995 ATP5G1P05496 136 aa11.7□□□□□ -0.54
COG3-201ENST00000349995 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
COG3-201ENST00000349995 Q9H8V8 135 aa11.7□□□□□ -0.54
COG3-201ENST00000349995 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
COG3-201ENST00000349995 TRAV23DV6A0A075B6W5 121 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 GHRHP01286 108 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 Q8N7P7 452 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 DSCR8Q96T75 97 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 TMEM219Q86XT9 240 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 SZT2Q5T011 3432 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
COG3-201ENST00000349995 A0A0J9YY99 117 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 CRLF1O75462 422 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 SETD2Q9BYW2 2564 aaPredicted RBP11.68□□□□□ -0.54
COG3-201ENST00000349995 ABCA2Q9BZC7 2435 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 IGHV1-69DA0A0B4J2H0 117 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 TRGV2A0A075B6R0 118 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 PRAC2D3DTV9 90 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 IGHV3-53P01767 116 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
COG3-201ENST00000349995 Q9HAA7 133 aa11.68□□□□□ -0.54
COG3-201ENST00000349995 PSMB8P28062 276 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 RPL36AP83881 106 aaKnown RBP11.67□□□□□ -0.54
COG3-201ENST00000349995 VMO1Q7Z5L0 202 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 RPL36ALQ969Q0 106 aaKnown RBP11.67□□□□□ -0.54
COG3-201ENST00000349995 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 IGHG2P01859 326 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 MPLKIPQ8TAP9 179 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 IGKV1D-37A0A075B6S9 117 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 ZNF80P51504 273 aaPredicted RBP11.67□□□□□ -0.54
COG3-201ENST00000349995 C22orf34Q6ZV56 151 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 RNF5Q99942 180 aa11.67□□□□□ -0.54
COG3-201ENST00000349995 USP9XQ93008 2570 aaPredicted RBP11.67□□□□□ -0.54
COG3-201ENST00000349995 SP5Q6BEB4 398 aaPredicted RBP11.66□□□□□ -0.54
COG3-201ENST00000349995 BPESC1Q9GZL8 116 aa11.66□□□□□ -0.54
COG3-201ENST00000349995 IGHV3-16A0A0C4DH30 117 aa11.66□□□□□ -0.54
COG3-201ENST00000349995 F6UB75 175 aa11.66□□□□□ -0.54
COG3-201ENST00000349995 TRIAP1O43715 76 aa11.66□□□□□ -0.54
COG3-201ENST00000349995 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
COG3-201ENST00000349995 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms