RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 C14orf178Q8N769 122 aaPredicted RBP19.25■□□□□ 0.67
SSBP4-202ENST00000348495 C18orf15Q96N68 181 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 GNB1LQ9BYB4 327 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 SAMD10Q9BYL1 202 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 RS1O15537 224 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 CFAP126Q5VTH2 177 aa19.25■□□□□ 0.67
SSBP4-202ENST00000348495 LINC00315P59091 139 aa19.24■□□□□ 0.67
SSBP4-202ENST00000348495 UFSP1Q6NVU6 142 aa19.24■□□□□ 0.67
SSBP4-202ENST00000348495 COL7A1Q02388 2944 aa19.24■□□□□ 0.67
SSBP4-202ENST00000348495 RAB5AP20339 215 aa19.23■□□□□ 0.67
SSBP4-202ENST00000348495 A0A087WWL8 130 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 TEX48A0A1B0GUV7 120 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 NACAE9PAV3 2078 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 DEFB130BP0DP73 79 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 DEFB130AP0DP74 79 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 SMIM15Q7Z3B0 74 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 RAB4BP61018 213 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 DPH3P1Q9H4G8 78 aa19.22■□□□□ 0.67
SSBP4-202ENST00000348495 TRGV2A0A075B6R0 118 aa19.21■□□□□ 0.67
SSBP4-202ENST00000348495 TRAV4A0A0B4J268 109 aa19.21■□□□□ 0.67
SSBP4-202ENST00000348495 HLA-DQA1P01909 254 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 FAM104BQ5XKR9 115 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 AMN1Q8IY45 258 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 RNF185Q96GF1 192 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 MT-ND6P03923 174 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 OR4C5Q8NGB2 326 aa19.2■□□□□ 0.66
SSBP4-202ENST00000348495 SMIM17P0DL12 118 aa19.19■□□□□ 0.66
SSBP4-202ENST00000348495 FAM74A4Q5TZK3 123 aa19.19■□□□□ 0.66
SSBP4-202ENST00000348495 ZFP2Q6ZN57 461 aa19.19■□□□□ 0.66
SSBP4-202ENST00000348495 ZNF479Q96JC4 524 aa19.19■□□□□ 0.66
SSBP4-202ENST00000348495 DAD1P61803 113 aa19.18■□□□□ 0.66
SSBP4-202ENST00000348495 SLAQ13239 276 aa19.18■□□□□ 0.66
SSBP4-202ENST00000348495 RHODO00212 210 aa19.17■□□□□ 0.66
SSBP4-202ENST00000348495 RAB4AP20338 218 aa19.17■□□□□ 0.66
SSBP4-202ENST00000348495 C12orf74Q32Q52 190 aa19.17■□□□□ 0.66
SSBP4-202ENST00000348495 RPS10P46783 165 aaKnown RBP19.17■□□□□ 0.66
SSBP4-202ENST00000348495 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-202ENST00000348495 MRPL18Q9H0U6 180 aaKnown RBP19.16■□□□□ 0.66
SSBP4-202ENST00000348495 TRAPPC1Q9Y5R8 145 aa19.16■□□□□ 0.66
SSBP4-202ENST00000348495 IGHV3-53P01767 116 aa19.15■□□□□ 0.66
SSBP4-202ENST00000348495 IGHV3-73A0A0B4J1V6 119 aa19.14■□□□□ 0.66
SSBP4-202ENST00000348495 CIDEAO60543 219 aa19.14■□□□□ 0.66
SSBP4-202ENST00000348495 MRPL51Q4U2R6 128 aaKnown RBP19.14■□□□□ 0.66
SSBP4-202ENST00000348495 STAB2Q8WWQ8 2551 aa19.14■□□□□ 0.65
SSBP4-202ENST00000348495 APCSP02743 223 aa19.14■□□□□ 0.65
SSBP4-202ENST00000348495 MGPP08493 103 aa19.14■□□□□ 0.65
SSBP4-202ENST00000348495 C11orf45Q8TAV5 145 aa19.13■□□□□ 0.65
SSBP4-202ENST00000348495 FRZBQ92765 325 aa19.13■□□□□ 0.65
SSBP4-202ENST00000348495 FABP9Q0Z7S8 132 aa19.12■□□□□ 0.65
SSBP4-202ENST00000348495 PHOX2AO14813 284 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 FHL2Q14192 279 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 ZNF56Q15929 161 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 Q6ZSN1 163 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 TRGC2P03986 189 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 U3KQK5 164 aa19.11■□□□□ 0.65
SSBP4-202ENST00000348495 TRAV26-2A0A0B4J265 109 aa19.1■□□□□ 0.65
SSBP4-202ENST00000348495 F5H697 171 aa19.1■□□□□ 0.65
SSBP4-202ENST00000348495 SUMO4Q6EEV6 95 aa19.1■□□□□ 0.65
SSBP4-202ENST00000348495 EDA2RQ9HAV5 297 aa19.1■□□□□ 0.65
SSBP4-202ENST00000348495 ATP5G1P05496 136 aa19.09■□□□□ 0.65
SSBP4-202ENST00000348495 HOXA5P20719 270 aa19.09■□□□□ 0.65
SSBP4-202ENST00000348495 NANOS2P60321 138 aaKnown RBP19.09■□□□□ 0.65
SSBP4-202ENST00000348495 MRAP2Q96G30 205 aa19.09■□□□□ 0.65
SSBP4-202ENST00000348495 GAS8-AS1O95177 125 aa19.08■□□□□ 0.65
SSBP4-202ENST00000348495 GATA1P15976 413 aaPredicted RBP19.08■□□□□ 0.65
SSBP4-202ENST00000348495 KIAA1644Q3SXP7 199 aa19.08■□□□□ 0.65
SSBP4-202ENST00000348495 M0QY20 66 aa19.08■□□□□ 0.64
SSBP4-202ENST00000348495 Q6ZTC4 211 aa19.07■□□□□ 0.64
SSBP4-202ENST00000348495 TRGV4A0A0C4DH28 118 aa19.06■□□□□ 0.64
SSBP4-202ENST00000348495 D6R8Y8 96 aa19.06■□□□□ 0.64
SSBP4-202ENST00000348495 SMKR1H3BMG3 65 aa19.06■□□□□ 0.64
SSBP4-202ENST00000348495 PPBPP02775 128 aa19.06■□□□□ 0.64
SSBP4-202ENST00000348495 NCR2O95944 276 aa19.05■□□□□ 0.64
SSBP4-202ENST00000348495 CKS2P33552 79 aa19.05■□□□□ 0.64
SSBP4-202ENST00000348495 ORMDL3Q8N138 153 aa19.05■□□□□ 0.64
SSBP4-202ENST00000348495 SLC25A29Q8N8R3 303 aa19.04■□□□□ 0.64
SSBP4-202ENST00000348495 TRBV6-4A0A1B0GX49 114 aa19.03■□□□□ 0.64
SSBP4-202ENST00000348495 NRACQ8N912 160 aa19.03■□□□□ 0.64
SSBP4-202ENST00000348495 ALKBH7Q9BT30 221 aaPredicted RBP19.03■□□□□ 0.64
SSBP4-202ENST00000348495 HHLA3Q9XRX5 114 aa19.03■□□□□ 0.64
SSBP4-202ENST00000348495 H7C1H1 209 aa19.02■□□□□ 0.63
SSBP4-202ENST00000348495 Q9UF83 564 aa19.02■□□□□ 0.63
SSBP4-202ENST00000348495 K7EQD1 137 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 P0DMU3 169 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 FAM231AP0DMU4 169 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 FAM231CP0DMU5 169 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 CRYBA4P53673 196 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 RPL39LQ96EH5 51 aaKnown RBP19.01■□□□□ 0.63
SSBP4-202ENST00000348495 PRELID3AQ96N28 172 aa19.01■□□□□ 0.63
SSBP4-202ENST00000348495 F5H768 121 aa19■□□□□ 0.63
SSBP4-202ENST00000348495 PRO0255Q9UI72 69 aa19■□□□□ 0.63
SSBP4-202ENST00000348495 NPYP01303 97 aa19■□□□□ 0.63
SSBP4-202ENST00000348495 HTN3P15516 51 aa19■□□□□ 0.63
SSBP4-202ENST00000348495 SRIP30626 198 aa19■□□□□ 0.63
SSBP4-202ENST00000348495 LAMTOR2Q9Y2Q5 125 aa18.99■□□□□ 0.63
SSBP4-202ENST00000348495 TRBV10-1A0A0K0K1A3 114 aa18.98■□□□□ 0.63
SSBP4-202ENST00000348495 TNFRSF6BO95407 300 aa18.98■□□□□ 0.63
SSBP4-202ENST00000348495 NIT2Q9NQR4 276 aa18.98■□□□□ 0.63
SSBP4-202ENST00000348495 PPP1R17O96001 155 aa18.97■□□□□ 0.63
SSBP4-202ENST00000348495 RHOHQ15669 191 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms