RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PROP1O75360 226 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 P0C879 139 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 ADAMTSL5Q6ZMM2 481 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 GYPEP15421 78 aa12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 NHP2Q9NX24 153 aaKnown RBP12.54□□□□□ -0.4
SMARCA4-201ENST00000344626 F8W735 103 aaPredicted RBP12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 K7EQD1 137 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 SCGB1A1P11684 91 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 MAP6D1Q9H9H5 199 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 CRYGBP07316 175 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 HSD52Q0P140 79 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 ZC2HC1BQ5TFG8 222 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 LINC00482Q8N8I6 264 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 ATP6V0E2Q8NHE4 81 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 C18orf32Q8TCD1 76 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 K7EMI3 77 aa12.53□□□□□ -0.4
SMARCA4-201ENST00000344626 DEFB1P60022 68 aa12.52□□□□□ -0.4
SMARCA4-201ENST00000344626 MORN5Q5VZ52 161 aa12.52□□□□□ -0.4
SMARCA4-201ENST00000344626 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.4
SMARCA4-201ENST00000344626 MRPL36Q9P0J6 103 aaKnown RBP12.52□□□□□ -0.4
SMARCA4-201ENST00000344626 IGKV2D-24A0A075B6R9 120 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 A0A0J9YX75 114 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 SPRY2O43597 315 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 FAM110AQ9BQ89 295 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 ERG28Q9UKR5 140 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 HERVK_113P63121 156 aa12.52□□□□□ -0.41
SMARCA4-201ENST00000344626 C3orf79P0CE67 100 aa12.51□□□□□ -0.41
SMARCA4-201ENST00000344626 ZNF702PQ9H963 129 aa12.51□□□□□ -0.41
SMARCA4-201ENST00000344626 ORAOV1Q8WV07 137 aa12.51□□□□□ -0.41
SMARCA4-201ENST00000344626 C1orf43Q9BWL3 253 aa12.51□□□□□ -0.41
SMARCA4-201ENST00000344626 BRCA2P51587 3418 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 DEFB114Q30KQ6 69 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 VWC2LB2RUY7 222 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 NPYP01303 97 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 LYPD6BQ8NI32 183 aa12.5□□□□□ -0.41
SMARCA4-201ENST00000344626 MED14OSP0DP75 135 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 NPC2P61916 151 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 CLPSL2Q6UWE3 100 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 Q8N1Y9 231 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 H3BMM0 161 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 K7EN84 100 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 TMEM263Q8WUH6 116 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 UBE2WQ96B02 151 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 Q6ZS46 218 aa12.49□□□□□ -0.41
SMARCA4-201ENST00000344626 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 F8WEM9 126 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 EIF4EBP1Q13541 118 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 Q6ZPA2 131 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 ESDP10768 282 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
SMARCA4-201ENST00000344626 C1orf229Q6ZS94 237 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 Q8N6K4 173 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 C5orf42Q9H799 3197 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 TRBV6-1A0A0K0K1D8 114 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 Q6ZQT7 251 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 OVOL2Q9BRP0 275 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 TEP1Q99973 2627 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-201ENST00000344626 SMIM9A6NGZ8 99 aa12.46□□□□□ -0.41
SMARCA4-201ENST00000344626 NDUFA7O95182 113 aa12.46□□□□□ -0.41
SMARCA4-201ENST00000344626 IGKV1D-37A0A075B6S9 117 aa12.46□□□□□ -0.41
SMARCA4-201ENST00000344626 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
SMARCA4-201ENST00000344626 ODF3Q96PU9 254 aa12.46□□□□□ -0.42
SMARCA4-201ENST00000344626 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.42
SMARCA4-201ENST00000344626 PSMB8P28062 276 aa12.45□□□□□ -0.42
SMARCA4-201ENST00000344626 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
SMARCA4-201ENST00000344626 SUMO4Q6EEV6 95 aa12.45□□□□□ -0.42
SMARCA4-201ENST00000344626 ZNF503Q96F45 646 aa12.45□□□□□ -0.42
SMARCA4-201ENST00000344626 PRSS29PA6NIE9 313 aa12.45□□□□□ -0.42
SMARCA4-201ENST00000344626 C10orf91Q5T1B1 145 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 A0A1B0GWB2 263 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 K7EQG2 157 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 ATXN8Q156A1 80 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 CHD9Q3L8U1 2897 aa12.44□□□□□ -0.42
SMARCA4-201ENST00000344626 RNF183Q96D59 192 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 COL4A2P08572 1712 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 C18orf65Q6ZTR6 163 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 H3BUT2 72 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 TSPAN13O95857 204 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 PFN2P35080 140 aa12.43□□□□□ -0.42
SMARCA4-201ENST00000344626 ZNF625Q96I27 306 aaPredicted RBP12.42□□□□□ -0.42
SMARCA4-201ENST00000344626 C11orf1Q9H5F2 150 aa12.42□□□□□ -0.42
SMARCA4-201ENST00000344626 XCL1P47992 114 aa12.42□□□□□ -0.42
SMARCA4-201ENST00000344626 ASPHD1Q5U4P2 390 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms