RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 SPINK13Q1W4C9 94 aa15.91■□□□□ 0.14
CCDC38-201ENST00000344280 BAALCQ8WXS3 180 aa15.91■□□□□ 0.14
CCDC38-201ENST00000344280 K7EMI3 77 aa15.91■□□□□ 0.14
CCDC38-201ENST00000344280 CHTOPQ9Y3Y2 248 aaKnown RBP15.91■□□□□ 0.14
CCDC38-201ENST00000344280 EPG5Q9HCE0 2579 aa15.9■□□□□ 0.14
CCDC38-201ENST00000344280 IGHV3-16A0A0C4DH30 117 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 DEFB136Q30KP8 78 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 DUSP14O95147 198 aaKnown RBP15.89■□□□□ 0.13
CCDC38-201ENST00000344280 HLA-DRB4P13762 266 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 FAM74A4Q5TZK3 123 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 Q8N1Y9 231 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 HLA-DRB4X5D2U9 266 aa15.89■□□□□ 0.13
CCDC38-201ENST00000344280 F5H697 171 aa15.88■□□□□ 0.13
CCDC38-201ENST00000344280 ELANEP08246 267 aa15.88■□□□□ 0.13
CCDC38-201ENST00000344280 C9orf85Q96MD7 179 aa15.88■□□□□ 0.13
CCDC38-201ENST00000344280 PRSS29PA6NIE9 313 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 K7ERJ3 54 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 POLR2KP53803 58 aaKnown RBP15.87■□□□□ 0.13
CCDC38-201ENST00000344280 UBE2E2Q96LR5 201 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 ODF3Q96PU9 254 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 AKAP9Q99996 3911 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 GAGE10A6NGK3 116 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 LGALS9O00182 355 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 PPP1R17O96001 155 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 ZNF843Q8N446 348 aa15.87■□□□□ 0.13
CCDC38-201ENST00000344280 TSHBP01222 138 aa15.86■□□□□ 0.13
CCDC38-201ENST00000344280 HIST2H2BDQ6DRA6 164 aa15.86■□□□□ 0.13
CCDC38-201ENST00000344280 GAGE12BA1L429 117 aa15.85■□□□□ 0.13
CCDC38-201ENST00000344280 SLURP1P55000 103 aa15.85■□□□□ 0.13
CCDC38-201ENST00000344280 UFSP1Q6NVU6 142 aa15.85■□□□□ 0.13
CCDC38-201ENST00000344280 CRYGDP07320 174 aa15.85■□□□□ 0.13
CCDC38-201ENST00000344280 RPL39P62891 51 aaKnown RBP15.85■□□□□ 0.13
CCDC38-201ENST00000344280 APCP25054 2843 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 SONP18583 2426 aaKnown RBP15.84■□□□□ 0.13
CCDC38-201ENST00000344280 TCTEX1D4Q5JR98 221 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 Q5PR19 223 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 ZFP2Q6ZN57 461 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 CST9LQ9H4G1 147 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 TP53TG1Q9Y2A0 90 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 CUBNO60494 3623 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 AMTNQ6UX39 209 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 CEND1Q8N111 149 aa15.84■□□□□ 0.13
CCDC38-201ENST00000344280 PRRC2AP48634 2157 aaKnown RBP15.84■□□□□ 0.13
CCDC38-201ENST00000344280 IGHV1OR15-1A0A075B7D0 117 aa15.83■□□□□ 0.13
CCDC38-201ENST00000344280 SDHAF1A6NFY7 115 aa15.83■□□□□ 0.13
CCDC38-201ENST00000344280 SMIM13P0DJ93 91 aa15.83■□□□□ 0.12
CCDC38-201ENST00000344280 MORN3Q6PF18 240 aaPredicted RBP15.83■□□□□ 0.12
CCDC38-201ENST00000344280 RNF152Q8N8N0 203 aa15.83■□□□□ 0.12
CCDC38-201ENST00000344280 DUX3Q96PT4 197 aa15.83■□□□□ 0.12
CCDC38-201ENST00000344280 CYSLTR1Q9Y271 337 aa15.83■□□□□ 0.12
CCDC38-201ENST00000344280 RBMY1A1P0DJD3 496 aaKnown RBP15.82■□□□□ 0.12
CCDC38-201ENST00000344280 RBMY1CP0DJD4 496 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 EMP1P54849 157 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 RBMY1FQ15415 496 aaKnown RBP15.82■□□□□ 0.12
CCDC38-201ENST00000344280 TM2D2Q9BX73 214 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 A0A1W2PPM0 123 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 KNCNA6PVL3 124 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 RPL32P62910 135 aaKnown RBP15.82■□□□□ 0.12
CCDC38-201ENST00000344280 DEFB113Q30KQ7 82 aa15.82■□□□□ 0.12
CCDC38-201ENST00000344280 NHP2Q9NX24 153 aaKnown RBP15.82■□□□□ 0.12
CCDC38-201ENST00000344280 IGIPA6NJ69 53 aa15.81■□□□□ 0.12
CCDC38-201ENST00000344280 K7EP34 96 aa15.81■□□□□ 0.12
CCDC38-201ENST00000344280 PHLDA1Q8WV24 401 aaPredicted RBP15.81■□□□□ 0.12
CCDC38-201ENST00000344280 ZNF56Q15929 161 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 FOXI2Q6ZQN5 318 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 OR11H12B2RN74 326 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 M0QY20 66 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 VCYO14598 125 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 OR11H1Q8NG94 326 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 OR11H2Q8NH07 326 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 Q96MF0 132 aa15.8■□□□□ 0.12
CCDC38-201ENST00000344280 ZNF256Q9Y2P7 627 aaPredicted RBP15.8■□□□□ 0.12
CCDC38-201ENST00000344280 KIR2DL4Q99706 377 aa15.79■□□□□ 0.12
CCDC38-201ENST00000344280 PRM2P04554 102 aa15.79■□□□□ 0.12
CCDC38-201ENST00000344280 GTF2H5Q6ZYL4 71 aa15.79■□□□□ 0.12
CCDC38-201ENST00000344280 IGLV4-69A0A075B6H9 119 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 TRBV27A0A0K0K1C4 114 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 MYMXA0A1B0GTQ4 84 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 OCIAD2Q56VL3 154 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 PRADC1Q9BSG0 188 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 ITPR3Q14573 2671 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 HTN1P15515 57 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 ZNF876PQ49A33 203 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 SAMD5Q5TGI4 173 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 SYT8Q8NBV8 401 aa15.78■□□□□ 0.12
CCDC38-201ENST00000344280 C11orf86A6NJI1 115 aa15.77■□□□□ 0.12
CCDC38-201ENST00000344280 DEFB131AP59861 70 aa15.77■□□□□ 0.12
CCDC38-201ENST00000344280 RNF151Q2KHN1 245 aa15.77■□□□□ 0.12
CCDC38-201ENST00000344280 SPCS1Q9Y6A9 102 aa15.77■□□□□ 0.12
CCDC38-201ENST00000344280 NF1P21359 2839 aa15.77■□□□□ 0.11
CCDC38-201ENST00000344280 TRBV6-5A0A0K0K1A5 114 aa15.77■□□□□ 0.11
CCDC38-201ENST00000344280 E9PLD3 99 aa15.77■□□□□ 0.11
CCDC38-201ENST00000344280 HIST1H4GQ99525 98 aa15.77■□□□□ 0.11
CCDC38-201ENST00000344280 TRBV7-3A0A075B6L6 115 aa15.75■□□□□ 0.11
CCDC38-201ENST00000344280 CD300EQ496F6 205 aaPredicted RBP15.75■□□□□ 0.11
CCDC38-201ENST00000344280 KRTAP1-3Q8IUG1 177 aa15.75■□□□□ 0.11
CCDC38-201ENST00000344280 CCDC168Q8NDH2 2452 aa15.75■□□□□ 0.11
CCDC38-201ENST00000344280 CHD6Q8TD26 2715 aa15.75■□□□□ 0.11
CCDC38-201ENST00000344280 Q8N2B8 174 aa15.75■□□□□ 0.11
CCDC38-201ENST00000344280 RBMY1BA6NDE4 496 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms