RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 CHCHD1Q96BP2 118 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 LAMTOR2Q9Y2Q5 125 aa9.84□□□□□ -0.83
HERPUD1-202ENST00000344114 ALMS1Q8TCU4 4167 aa9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 D6R8Y8 96 aa9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 CRXO43186 299 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 RAB4AP20338 218 aa9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 RNF185Q96GF1 192 aa9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 TIMM8BQ9Y5J9 83 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-202ENST00000344114 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 HSBP1O75506 76 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 INSP01308 110 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 CKS2P33552 79 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 AMTP48728 403 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 TRPT1Q86TN4 253 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 C9orf85Q96MD7 179 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 AP1S3Q96PC3 154 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 LINC00467Q9BRT7 94 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 DPH3P1Q9H4G8 78 aa9.82□□□□□ -0.84
HERPUD1-202ENST00000344114 M0R381 172 aa9.81□□□□□ -0.84
HERPUD1-202ENST00000344114 FXYD7P58549 80 aa9.81□□□□□ -0.84
HERPUD1-202ENST00000344114 PYY3Q5JQD4 70 aa9.81□□□□□ -0.84
HERPUD1-202ENST00000344114 NIT1Q86X76 327 aa9.81□□□□□ -0.84
HERPUD1-202ENST00000344114 IL17DQ8TAD2 202 aa9.81□□□□□ -0.84
HERPUD1-202ENST00000344114 PMCHP20382 165 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 EVI2AP22794 236 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 NUTF2P61970 127 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 JOSD1Q15040 202 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
HERPUD1-202ENST00000344114 LINC00614P0C842 121 aa9.79□□□□□ -0.84
HERPUD1-202ENST00000344114 RBMY1A1P0DJD3 496 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-202ENST00000344114 RBMY1CP0DJD4 496 aa9.79□□□□□ -0.84
HERPUD1-202ENST00000344114 RBMY1FQ15415 496 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-202ENST00000344114 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
HERPUD1-202ENST00000344114 CBY3A6NI87 242 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 NCR2O95944 276 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 NPYP01303 97 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 FA2HQ7L5A8 372 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 PRSS3P2Q8NHM4 247 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
HERPUD1-202ENST00000344114 SMKR1H3BMG3 65 aa9.77□□□□□ -0.84
HERPUD1-202ENST00000344114 ZNF415Q09FC8 603 aa9.77□□□□□ -0.84
HERPUD1-202ENST00000344114 AP5S1Q9NUS5 200 aa9.77□□□□□ -0.84
HERPUD1-202ENST00000344114 HERC2O95714 4834 aa9.77□□□□□ -0.85
HERPUD1-202ENST00000344114 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 Q6ZWC4 215 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 POM121L12Q8N7R1 296 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 RETNQ9HD89 108 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 NIT2Q9NQR4 276 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 MDFICQ9P1T7 246 aa9.76□□□□□ -0.85
HERPUD1-202ENST00000344114 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 IFI27P40305 119 aaPredicted RBP9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 MORN3Q6PF18 240 aaPredicted RBP9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 GTSCR1Q86UQ5 136 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 DEFB125Q8N687 156 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 C14orf178Q8N769 122 aaPredicted RBP9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 LINC00476Q8WZB0 136 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 SPRY2O43597 315 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 PPP1R17O96001 155 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 MGPP08493 103 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 NRACQ8N912 160 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 PTH2Q96A98 100 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 LINC01587Q99440 93 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 C1QTNF4Q9BXJ3 329 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 KIF25-AS1Q9Y6Z4 181 aa9.75□□□□□ -0.85
HERPUD1-202ENST00000344114 LOC389332A0A1B0GUA5 103 aa9.74□□□□□ -0.85
HERPUD1-202ENST00000344114 LINC01546A6NGU7 62 aa9.74□□□□□ -0.85
HERPUD1-202ENST00000344114 SPXQ9BT56 116 aa9.74□□□□□ -0.85
HERPUD1-202ENST00000344114 WFDC10AQ9H1F0 79 aa9.74□□□□□ -0.85
HERPUD1-202ENST00000344114 Q8N8P6 123 aa9.73□□□□□ -0.85
HERPUD1-202ENST00000344114 TMEM208Q9BTX3 173 aa9.73□□□□□ -0.85
HERPUD1-202ENST00000344114 NDUFAF3Q9BU61 184 aa9.73□□□□□ -0.85
HERPUD1-202ENST00000344114 KMT2AQ03164 3969 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 TRAV26-2A0A0B4J265 109 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 M0R2P5 195 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 GAS8-AS1O95177 125 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 LEPROTL1O95214 131 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 SCGB1D1O95968 90 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 GATA1P15976 413 aaPredicted RBP9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 KRTDAPP60985 99 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 C20orf78Q9BR46 151 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 GOLT1BQ9Y3E0 138 aa9.72□□□□□ -0.85
HERPUD1-202ENST00000344114 C3orf79P0CE67 100 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 HTN1P15515 57 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 LINC00315P59091 139 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 S100A12P80511 92 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 PMCHL1Q16048 86 aa9.71□□□□□ -0.86
HERPUD1-202ENST00000344114 ZNF876PQ49A33 203 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms