RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 C11orf71Q6IPW1 123 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 Q8N8P6 123 aa9.56□□□□□ -0.88
LMX1A-202ENST00000342310 KIR2DL4Q99706 377 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 IGHV3-16A0A0C4DH30 117 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 NIPBLQ6KC79 2804 aaeCLIP9.55□□□□□ -0.88
LMX1A-202ENST00000342310 TMEM238LA0A1B0GVL6 79 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 ZNF493Q6ZR52 646 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 ITLN2Q8WWU7 325 aaPredicted RBP9.55□□□□□ -0.88
LMX1A-202ENST00000342310 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
LMX1A-202ENST00000342310 MXRA5Q9NR99 2828 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 C9orf139Q6ZV77 190 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 OR5A1Q8NGJ0 315 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 USP24Q9UPU5 2620 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 GCN1Q92616 2671 aaKnown RBP9.54□□□□□ -0.88
LMX1A-202ENST00000342310 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 DPH3P1Q9H4G8 78 aa9.54□□□□□ -0.88
LMX1A-202ENST00000342310 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
LMX1A-202ENST00000342310 RNF223E7ERA6 249 aa9.53□□□□□ -0.88
LMX1A-202ENST00000342310 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
LMX1A-202ENST00000342310 G3V4G9 280 aa9.53□□□□□ -0.88
LMX1A-202ENST00000342310 AVPP01185 164 aa9.53□□□□□ -0.88
LMX1A-202ENST00000342310 ID1P41134 155 aa9.53□□□□□ -0.88
LMX1A-202ENST00000342310 DAZ1Q9NQZ3 744 aaKnown RBP9.53□□□□□ -0.88
LMX1A-202ENST00000342310 TRAV2A0A0B4J234 112 aa9.52□□□□□ -0.88
LMX1A-202ENST00000342310 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.88
LMX1A-202ENST00000342310 HOXA3O43365 443 aaPredicted RBP9.52□□□□□ -0.88
LMX1A-202ENST00000342310 ZNF876PQ49A33 203 aa9.52□□□□□ -0.88
LMX1A-202ENST00000342310 MDFICQ9P1T7 246 aa9.52□□□□□ -0.88
LMX1A-202ENST00000342310 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 SDHAF1A6NFY7 115 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 DEFB112Q30KQ8 113 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 C12orf74Q32Q52 190 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 Q8N6K4 173 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 GATD1Q8NB37 220 aa9.52□□□□□ -0.89
LMX1A-202ENST00000342310 IGHV3-53P01767 116 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 MSMBP08118 114 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 FBXL19-AS1Q494R0 122 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 CEND1Q8N111 149 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 H7C1H1 209 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
LMX1A-202ENST00000342310 CEMP1Q6PRD7 247 aaPredicted RBP9.51□□□□□ -0.89
LMX1A-202ENST00000342310 P0DMU3 169 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 FAM231AP0DMU4 169 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 FAM231CP0DMU5 169 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 CKS1BP61024 79 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
LMX1A-202ENST00000342310 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 SPXQ9BT56 116 aa9.51□□□□□ -0.89
LMX1A-202ENST00000342310 HELZ2Q9BYK8 2649 aaKnown RBP9.5□□□□□ -0.89
LMX1A-202ENST00000342310 IGHV7-4-1A0A0J9YVY3 117 aa9.5□□□□□ -0.89
LMX1A-202ENST00000342310 ORMDL2Q53FV1 153 aa9.5□□□□□ -0.89
LMX1A-202ENST00000342310 IGLL5B9A064 214 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 F8VRH5 84 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 OVOL1O14753 267 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 DEFB131AP59861 70 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 RASL10AQ92737 203 aa9.49□□□□□ -0.89
LMX1A-202ENST00000342310 LGALS3P17931 250 aaKnown RBP9.49□□□□□ -0.89
LMX1A-202ENST00000342310 A0A087WX48 190 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 HERVK_113P61574 105 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 ZFP2Q6ZN57 461 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 DYNLRB2Q8TF09 96 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 HHLA3Q9XRX5 114 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 MUC4Q99102 2169 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 PLEKHB2Q96CS7 222 aa9.48□□□□□ -0.89
LMX1A-202ENST00000342310 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
LMX1A-202ENST00000342310 A0A1B0GV72 72 aa9.47□□□□□ -0.89
LMX1A-202ENST00000342310 SPINK8P0C7L1 97 aa9.47□□□□□ -0.89
LMX1A-202ENST00000342310 PROK1P58294 105 aa9.47□□□□□ -0.89
LMX1A-202ENST00000342310 APRG1Q8IVJ8 170 aa9.47□□□□□ -0.89
LMX1A-202ENST00000342310 NRACQ8N912 160 aa9.47□□□□□ -0.89
LMX1A-202ENST00000342310 FAM223BA6NKX1 122 aa9.46□□□□□ -0.89
LMX1A-202ENST00000342310 NDUFA4O00483 81 aa9.46□□□□□ -0.89
LMX1A-202ENST00000342310 FAM223AQ8IWN6 122 aa9.46□□□□□ -0.89
LMX1A-202ENST00000342310 TRBV6-1A0A0K0K1D8 114 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 PLNP26678 52 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 EBI3Q14213 229 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 Q8N1Y9 231 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 LINC01587Q99440 93 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 U3KQK5 164 aa9.46□□□□□ -0.9
LMX1A-202ENST00000342310 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 SLURP1P55000 103 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 C9orf47Q6ZRZ4 202 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 XCL2Q9UBD3 114 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 SMPXQ9UHP9 88 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 MYMXA0A1B0GTQ4 84 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 B4DSR2 109 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 VCX2Q9H322 139 aa9.45□□□□□ -0.9
LMX1A-202ENST00000342310 ITPR2Q14571 2701 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms