RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ARMS2P0C7Q2 107 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 LINC01587Q99440 93 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 Q9H3A6 140 aa11.18□□□□□ -0.62
PBX3-201ENST00000342287 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 TRBV19A0A075B6N1 114 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 IGHV3OR16-8A0A075B7F1 116 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 PRSS1P07477 247 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 PSMB8P28062 276 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 CHCHD5Q9BSY4 110 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
PBX3-201ENST00000342287 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 D6R8Y8 96 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 A0A1B0GUT8 65 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 IGHV3-11P01762 117 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 TMEM190Q8WZ59 177 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
PBX3-201ENST00000342287 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
PBX3-201ENST00000342287 MXRA5Q9NR99 2828 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 HECTD1Q9ULT8 2610 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 CLPSL1A2RUU4 121 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 C9JAW5 83 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 IGKCP01834 107 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 PDE6HQ13956 83 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 CT83Q5H943 113 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 C17orf77Q96MU5 243 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 METTL26Q96S19 204 aa11.15□□□□□ -0.62
PBX3-201ENST00000342287 TRBV12-3P01733 135 aa11.15□□□□□ -0.63
PBX3-201ENST00000342287 TAL2Q16559 108 aa11.15□□□□□ -0.63
PBX3-201ENST00000342287 Q8N2B8 174 aa11.15□□□□□ -0.63
PBX3-201ENST00000342287 GFRA4Q9GZZ7 299 aa11.15□□□□□ -0.63
PBX3-201ENST00000342287 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
PBX3-201ENST00000342287 C19orf71A6NCJ1 209 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 F5H768 121 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 BUB3O43684 328 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 NDUFA4O00483 81 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 EXOC3-AS1Q8N2X6 119 aa11.14□□□□□ -0.63
PBX3-201ENST00000342287 ASIPP42127 132 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 RIGQ13278 110 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 Q6Q795 121 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 MLST8Q9BVC4 326 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 EDA2RQ9HAV5 297 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 TCRAP04437 139 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 ELANEP08246 267 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 SRSF9Q13242 221 aaKnown RBP eCLIP11.13□□□□□ -0.63
PBX3-201ENST00000342287 C10orf99Q6UWK7 81 aa11.13□□□□□ -0.63
PBX3-201ENST00000342287 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 TCL1BO95988 128 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 EMP1P54849 157 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 TMEM101Q96IK0 257 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 AAMDCQ9H7C9 122 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 U3KQE9 123 aa11.12□□□□□ -0.63
PBX3-201ENST00000342287 TRBV7-3A0A075B6L6 115 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 DNAJC9-AS1A6NH13 148 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 ZNF492Q9P255 531 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 TLN2Q9Y4G6 2542 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 J3KT08 172 aa11.11□□□□□ -0.63
PBX3-201ENST00000342287 IGHV3-66A0A0C4DH42 116 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 DPM2O94777 84 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 Q71RC1 249 aaPredicted RBP11.1□□□□□ -0.63
PBX3-201ENST00000342287 RNF152Q8N8N0 203 aa11.1□□□□□ -0.63
PBX3-201ENST00000342287 IGHV3OR16-13A0A075B7E8 117 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 IGHV3-74A0A0B4J1X5 117 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
PBX3-201ENST00000342287 AKAP9Q99996 3911 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 ORMDL3Q8N138 153 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
PBX3-201ENST00000342287 GOLT1AQ6ZVE7 132 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 UBE2E2Q96LR5 201 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
PBX3-201ENST00000342287 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 ASCL2Q99929 193 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 SMR3AQ99954 134 aa11.08□□□□□ -0.64
PBX3-201ENST00000342287 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 HERVK_113P63121 156 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 TWIST1Q15672 202 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 GPHB5Q86YW7 130 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 HLA-DRB4X5D2U9 266 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 M0R3E3 92 aa11.07□□□□□ -0.64
PBX3-201ENST00000342287 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms