RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 A0A087WWL8 130 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 GNRH2O43555 120 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 DEFB130BP0DP73 79 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 DEFB130AP0DP74 79 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 ZNF876PQ49A33 203 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 GDF5OSQ5U4N7 250 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 DGAT2L7PQ6IED9 249 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 SFTA2Q6UW10 78 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 A0A0J9YX75 114 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
C2orf88-201ENST00000340623 IFI27L1Q96BM0 104 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 INSL3P51460 131 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 C19orf54Q5BKX5 351 aa8.82□□□□□ -1
C2orf88-201ENST00000340623 TRAV8-2A0A0B4J237 113 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 KLF12Q9Y4X4 402 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 IGHV1-24A0A0C4DH33 117 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 HBDP02042 147 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 TMEM97Q5BJF2 176 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 C9orf47Q6ZRZ4 202 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 LENEPQ9Y5L5 61 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 U3KQE9 123 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
C2orf88-201ENST00000340623 A0A1B0GW15 77 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 WFDC10AQ9H1F0 79 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 TRAV26-1A0A087WT03 109 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 AZU1P20160 251 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 APOC4P55056 127 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 SCGB3A1Q96QR1 104 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 TRGV4A0A0C4DH28 118 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 NPYP01303 97 aa8.8□□□□□ -1
C2orf88-201ENST00000340623 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
C2orf88-201ENST00000340623 COL6A5A8TX70 2615 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 GAGE10A6NGK3 116 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 G3V4G9 280 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 ESDP10768 282 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
C2orf88-201ENST00000340623 KRTAP24-1Q3LI83 254 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 BVES-AS1Q5T3Y7 98 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 RASL11AQ6T310 242 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 TNFRSF18Q9Y5U5 241 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 H7C2G1 150 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 FAM104BQ5XKR9 115 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 CHCHD1Q96BP2 118 aaKnown RBP8.79□□□□□ -1
C2orf88-201ENST00000340623 HIVEP1P15822 2718 aa8.79□□□□□ -1
C2orf88-201ENST00000340623 KIR3DS1Q14943 382 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 CT83Q5H943 113 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
C2orf88-201ENST00000340623 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 TENM4Q6N022 2769 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 MGAM2Q2M2H8 2515 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 IGKV3OR2-268A0A0C4DH90 116 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 H7C1H1 209 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 MRPS12O15235 138 aaKnown RBP8.78□□□□□ -1
C2orf88-201ENST00000340623 HLA-DRB4P13762 266 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 ZNF80P51504 273 aaPredicted RBP8.78□□□□□ -1
C2orf88-201ENST00000340623 DCANP1Q8TF63 244 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 SIGLEC8Q9NYZ4 499 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 HLA-DRB4X5D2U9 266 aa8.78□□□□□ -1
C2orf88-201ENST00000340623 TNFRSF6BO95407 300 aa8.77□□□□□ -1
C2orf88-201ENST00000340623 CRYBA4P53673 196 aa8.77□□□□□ -1
C2orf88-201ENST00000340623 STAB1Q9NY15 2570 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 FAM231BA6NCW3 169 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 NPIPB6E9PJ23 425 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 H3BMM0 161 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 GAGE7O76087 117 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 GAGE12FP0CL80 117 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 GAGE12GP0CL81 117 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 GAGE12IP0CL82 117 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 DEFB135Q30KP9 77 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 KIR2DL4Q99706 377 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 AGRNO00468 2067 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 IGHV3-16A0A0C4DH30 117 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
C2orf88-201ENST00000340623 Q1RN00 199 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
C2orf88-201ENST00000340623 PRSS2P07478 247 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 SCGB1C2P0DMR2 95 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 IGKV3D-20A0A0C4DH25 116 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
C2orf88-201ENST00000340623 PET117Q6UWS5 81 aa8.76□□□□□ -1.01
C2orf88-201ENST00000340623 A0A1B0GV72 72 aa8.75□□□□□ -1.01
C2orf88-201ENST00000340623 Q8N1Y9 231 aa8.75□□□□□ -1.01
C2orf88-201ENST00000340623 PRB2P02812 416 aaPredicted RBP8.74□□□□□ -1.01
C2orf88-201ENST00000340623 CRIP1P50238 77 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 ZC2HC1BQ5TFG8 222 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 NOP10Q9NPE3 64 aaKnown RBP8.74□□□□□ -1.01
C2orf88-201ENST00000340623 A6NDN8 102 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 H3BUT2 72 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 Q6ZQT7 251 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 MLST8Q9BVC4 326 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 DEFB4AO15263 64 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 OR2K2Q8NGT1 345 aa8.74□□□□□ -1.01
C2orf88-201ENST00000340623 NXT2Q9NPJ8 142 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms