RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
SDCBP2-201ENST00000339987 ATP5L2Q7Z4Y8 100 aa12.67□□□□□ -0.38
SDCBP2-201ENST00000339987 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
SDCBP2-201ENST00000339987 OR4C5Q8NGB2 326 aa12.67□□□□□ -0.38
SDCBP2-201ENST00000339987 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
SDCBP2-201ENST00000339987 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
SDCBP2-201ENST00000339987 A0A1B0GXF2 115 aa12.66□□□□□ -0.38
SDCBP2-201ENST00000339987 CIDEAO60543 219 aa12.66□□□□□ -0.38
SDCBP2-201ENST00000339987 JPT2Q9H910 190 aa12.66□□□□□ -0.38
SDCBP2-201ENST00000339987 STAB2Q8WWQ8 2551 aa12.65□□□□□ -0.38
SDCBP2-201ENST00000339987 ATP5G1P05496 136 aa12.65□□□□□ -0.38
SDCBP2-201ENST00000339987 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
SDCBP2-201ENST00000339987 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
SDCBP2-201ENST00000339987 RHODO00212 210 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 S100A8P05109 93 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 CRYGDP07320 174 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 HBBP68871 147 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 UFSP1Q6NVU6 142 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 ZFP2Q6ZN57 461 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 Q6ZTC4 211 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 SMIM15Q7Z3B0 74 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 ZNF479Q96JC4 524 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
SDCBP2-201ENST00000339987 C1orf196B1AJZ1 125 aa12.63□□□□□ -0.39
SDCBP2-201ENST00000339987 IGHV3-53P01767 116 aa12.63□□□□□ -0.39
SDCBP2-201ENST00000339987 RAB5BP61020 215 aa12.63□□□□□ -0.39
SDCBP2-201ENST00000339987 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
SDCBP2-201ENST00000339987 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
SDCBP2-201ENST00000339987 A0A087WWL8 130 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 EVI2AP22794 236 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 RASL11AQ6T310 242 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 GATD1Q8NB37 220 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 TMEM191AQ9H0A3 160 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 CAMPP49913 170 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 FAM74A4Q5TZK3 123 aa12.62□□□□□ -0.39
SDCBP2-201ENST00000339987 TRAV10A0A0B4J240 114 aa12.61□□□□□ -0.39
SDCBP2-201ENST00000339987 LINC00315P59091 139 aa12.61□□□□□ -0.39
SDCBP2-201ENST00000339987 FHL2Q14192 279 aa12.61□□□□□ -0.39
SDCBP2-201ENST00000339987 COX19Q49B96 90 aa12.61□□□□□ -0.39
SDCBP2-201ENST00000339987 HOXA5P20719 270 aa12.6□□□□□ -0.39
SDCBP2-201ENST00000339987 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 IGHV3-73A0A0B4J1V6 119 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 TRGV4A0A0C4DH28 118 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 F5H768 121 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 HTN3P15516 51 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 SLAQ13239 276 aa12.59□□□□□ -0.39
SDCBP2-201ENST00000339987 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
SDCBP2-201ENST00000339987 RAB4BP61018 213 aa12.58□□□□□ -0.4
SDCBP2-201ENST00000339987 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
SDCBP2-201ENST00000339987 MGPP08493 103 aa12.57□□□□□ -0.4
SDCBP2-201ENST00000339987 ZNF56Q15929 161 aa12.57□□□□□ -0.4
SDCBP2-201ENST00000339987 FAM104BQ5XKR9 115 aa12.57□□□□□ -0.4
SDCBP2-201ENST00000339987 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
SDCBP2-201ENST00000339987 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
SDCBP2-201ENST00000339987 TRBV6-4A0A1B0GX49 114 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 TMEM136Q6ZRR5 245 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 Q6ZSN1 163 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 FRZBQ92765 325 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 RNF185Q96GF1 192 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 HHLA3Q9XRX5 114 aa12.56□□□□□ -0.4
SDCBP2-201ENST00000339987 RAB4AP20338 218 aa12.55□□□□□ -0.4
SDCBP2-201ENST00000339987 CRYBA4P53673 196 aa12.55□□□□□ -0.4
SDCBP2-201ENST00000339987 AMN1Q8IY45 258 aa12.55□□□□□ -0.4
SDCBP2-201ENST00000339987 GNB1LQ9BYB4 327 aa12.55□□□□□ -0.4
SDCBP2-201ENST00000339987 F5H697 171 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 MT-ND6P03923 174 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 SUMO4Q6EEV6 95 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 K7EQD1 137 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 TRGC2P03986 189 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 RHOHQ15669 191 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
SDCBP2-201ENST00000339987 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
SDCBP2-201ENST00000339987 H3BNG1 76 aa12.53□□□□□ -0.4
SDCBP2-201ENST00000339987 PAX4O43316 350 aa12.53□□□□□ -0.4
SDCBP2-201ENST00000339987 S100A6P06703 90 aa12.53□□□□□ -0.4
SDCBP2-201ENST00000339987 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
SDCBP2-201ENST00000339987 TRBV10-1A0A0K0K1A3 114 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 H7C1H1 209 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 M0QY20 66 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 MRPL51Q4U2R6 128 aaKnown RBP12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 MUC7Q8TAX7 377 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
SDCBP2-201ENST00000339987 A0A0J9YY99 117 aa12.5□□□□□ -0.41
SDCBP2-201ENST00000339987 TRAV26-2A0A0B4J265 109 aa12.49□□□□□ -0.41
SDCBP2-201ENST00000339987 APCSP02743 223 aa12.49□□□□□ -0.41
SDCBP2-201ENST00000339987 PPBPP02775 128 aa12.49□□□□□ -0.41
SDCBP2-201ENST00000339987 FABP9Q0Z7S8 132 aa12.49□□□□□ -0.41
SDCBP2-201ENST00000339987 DNAH7Q8WXX0 4024 aa12.49□□□□□ -0.41
SDCBP2-201ENST00000339987 P0DMU3 169 aa12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 FAM231AP0DMU4 169 aa12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 FAM231CP0DMU5 169 aa12.48□□□□□ -0.41
SDCBP2-201ENST00000339987 GYPEP15421 78 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms