RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SPANXN1Q5VSR9 72 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 LINC00482Q8N8I6 264 aa7.3□□□□□ -1.24
PTCHD4-201ENST00000339488 LST1O00453 97 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 IGKV1-17P01599 117 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 HES7Q9BYE0 225 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 TP53TG1Q9Y2A0 90 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 PTPRQQ9UMZ3 2332 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 SVEP1Q4LDE5 3571 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 M0R381 172 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 CCL21O00585 134 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 C9orf139Q6ZV77 190 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 DAND5Q8N907 189 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 PSMG3-AS1Q96PY0 264 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 CACNA1EQ15878 2313 aa7.29□□□□□ -1.24
PTCHD4-201ENST00000339488 IGHV3-35A0A0C4DH35 117 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 FAM223BA6NKX1 122 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 M0R1W7 72 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 NBL1P41271 181 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 FAM216BQ8N7L0 139 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 RIF1Q5UIP0 2472 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 H3BRN7 92 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 ATP5G1P05496 136 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 DAZ2Q13117 558 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 DAZ4Q86SG3 579 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 PRORYQ9H606 182 aa7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 DAZ1Q9NQZ3 744 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 DAZ3Q9NR90 486 aaKnown RBP7.28□□□□□ -1.24
PTCHD4-201ENST00000339488 ZFHX2Q9C0A1 2572 aaPredicted RBP7.27□□□□□ -1.24
PTCHD4-201ENST00000339488 NXPH4O95158 308 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 PLGLAQ15195 96 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 DYNAPQ8N1N2 210 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 TMEM167AQ8TBQ9 72 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 CNFNQ9BYD5 112 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 CGB3P0DN86 165 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 CGB7P0DN87 165 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 CCL3L1P16619 93 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 SPINK14Q6IE38 97 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 DCANP1Q8TF63 244 aa7.27□□□□□ -1.25
PTCHD4-201ENST00000339488 IGLV2-23P01705 113 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV3-23P01764 117 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 TIRAPP58753 221 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 ADAMTSL4-AS1Q5T5F5 129 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 CCL13Q99616 98 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 LINC00474Q9P2X8 69 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 ZNF292O60281 2723 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 A8MZ25 164 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 COX6CP09669 75 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 HILS1P60008 231 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 SS18Q15532 418 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 WFDC9Q8NEX5 89 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 RNF125Q96EQ8 232 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 RNF7Q9UBF6 113 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 IGKV3D-15A0A087WSY6 115 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 TMEM178BH3BS89 294 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 CCL8P80075 99 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 LPAL2Q16609 132 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 MRGPRG-AS1Q2M3A8 158 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
PTCHD4-201ENST00000339488 CACNA1BQ00975 2339 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 BOD1L1Q8NFC6 3051 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 OTOGLQ3ZCN5 2332 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV7-4-1A0A0J9YVY3 117 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 USP17L23D6RBM5 183 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 RNF223E7ERA6 249 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 GFRALQ6UXV0 394 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 C20orf197Q8N268 126 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 ZNF491Q8N8L2 437 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 SIRPDQ9H106 197 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 C16orf95Q9H693 158 aa7.25□□□□□ -1.25
PTCHD4-201ENST00000339488 RAI1Q7Z5J4 1906 aaPredicted RBP7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 POLEQ07864 2286 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 A0A0J9YXY3 114 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 RPL27AP46776 148 aaKnown RBP7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV3OR16-13A0A075B7E8 117 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV3-74A0A0B4J1X5 117 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV3-66A0A0C4DH42 116 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 SRRM5B3KS81 715 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 ACYP1P07311 99 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 CXCL5P42830 114 aa7.24□□□□□ -1.25
PTCHD4-201ENST00000339488 LMO7DNF2Z398 122 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 SPRY3O43610 288 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 IMMP1LQ96LU5 166 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 GVINP1Q7Z2Y8 2422 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 MSMPQ1L6U9 139 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 LAMA5O15230 3695 aa7.23□□□□□ -1.25
PTCHD4-201ENST00000339488 IGHV3OR16-10A0A075B7F0 116 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 LHBP01229 141 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 C9orf129Q5T035 196 aaKnown RBP7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 ZNF833PQ6ZTB9 187 aa7.22□□□□□ -1.25
PTCHD4-201ENST00000339488 LYPD1Q8N2G4 141 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms