RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZNF56Q15929 161 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 TMEM61Q8N0U2 210 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
SNCA-201ENST00000336904 K7ERJ3 54 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 DUSP14O95147 198 aaKnown RBP6.57□□□□□ -1.36
SNCA-201ENST00000336904 SUMO4Q6EEV6 95 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 MYOZ3Q8TDC0 251 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 HIVEP2P31629 2446 aa6.57□□□□□ -1.36
SNCA-201ENST00000336904 KLLNB2CW77 178 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 K7EQG2 157 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 IGKCP01834 107 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 MAPKAPK5-AS1Q8N8E1 139 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 AP1S3Q96PC3 154 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 SCGB3A1Q96QR1 104 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 ESM1Q9NQ30 184 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 HHLA3Q9XRX5 114 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 AMMECR1LQ6DCA0 310 aa6.56□□□□□ -1.36
SNCA-201ENST00000336904 GCSHP23434 173 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 J3QLI3 93 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 K7EMT4 169 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 FSHBP01225 129 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 C2orf66Q6UXQ4 117 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 LENEPQ9Y5L5 61 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 RBMY1BA6NDE4 496 aaKnown RBP6.55□□□□□ -1.36
SNCA-201ENST00000336904 RBMY1EA6NEQ0 496 aaKnown RBP6.55□□□□□ -1.36
SNCA-201ENST00000336904 RBMY1DP0C7P1 496 aaKnown RBP6.55□□□□□ -1.36
SNCA-201ENST00000336904 CDKN1BP46527 198 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
SNCA-201ENST00000336904 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 IGHV3-16A0A0C4DH30 117 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.54□□□□□ -1.36
SNCA-201ENST00000336904 LINC00315P59091 139 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 ZNF876PQ49A33 203 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
SNCA-201ENST00000336904 UBE2E2Q96LR5 201 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 TP53TG1Q9Y2A0 90 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 IGHV3-64A0A075B6Q5 118 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 DPM2O94777 84 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 Q6ZSV7 163 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 BOD1L2Q8IYS8 172 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 DYNLRB2Q8TF09 96 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 WFDC10AQ9H1F0 79 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
SNCA-201ENST00000336904 FXYD2P54710 66 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
SNCA-201ENST00000336904 OR1N2Q8NGR9 330 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 MRAP2Q96G30 205 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 SDHAF1A6NFY7 115 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 H3BUT2 72 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 ELANEP08246 267 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 CD28P10747 220 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
SNCA-201ENST00000336904 C12orf54Q6X4T0 127 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 YAE1D1Q9NRH1 226 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 XCL2Q9UBD3 114 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
SNCA-201ENST00000336904 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.36
SNCA-201ENST00000336904 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.36
SNCA-201ENST00000336904 CEMP1Q6PRD7 247 aaPredicted RBP6.52□□□□□ -1.36
SNCA-201ENST00000336904 LINC01619G3V211 115 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 BRI3O95415 125 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 MORN3Q6PF18 240 aaPredicted RBP6.52□□□□□ -1.37
SNCA-201ENST00000336904 DEFB125Q8N687 156 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 OR4C5Q8NGB2 326 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 OR9G4Q8NGQ1 327 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 BAALCQ8WXS3 180 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 CHTOPQ9Y3Y2 248 aaKnown RBP6.52□□□□□ -1.37
SNCA-201ENST00000336904 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 IGHV3-38A0A0C4DH36 116 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
SNCA-201ENST00000336904 A0A087WX48 190 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 ATP5LO75964 103 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 CITED2Q99967 270 aaPredicted RBP6.51□□□□□ -1.37
SNCA-201ENST00000336904 CHAC1Q9BUX1 264 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 MRPL16Q9NX20 251 aaKnown RBP6.51□□□□□ -1.37
SNCA-201ENST00000336904 TSHBP01222 138 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 RNASE8Q8TDE3 154 aaKnown RBP6.51□□□□□ -1.37
SNCA-201ENST00000336904 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 RAX2Q96IS3 184 aa6.51□□□□□ -1.37
SNCA-201ENST00000336904 LINC01546A6NGU7 62 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 CRYGDP07320 174 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 UBE2V1Q13404 147 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 ZFP2Q6ZN57 461 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 Q6ZSN1 163 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 NHP2Q9NX24 153 aaKnown RBP6.5□□□□□ -1.37
SNCA-201ENST00000336904 ZNF580Q9UK33 172 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
SNCA-201ENST00000336904 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 PHLDA1Q8WV24 401 aaPredicted RBP6.5□□□□□ -1.37
SNCA-201ENST00000336904 TOMM6Q96B49 74 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 ZMAT4Q9H898 229 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 MAP6D1Q9H9H5 199 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
SNCA-201ENST00000336904 IGHV3-53P01767 116 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 PLA2G2AP14555 144 aa6.5□□□□□ -1.37
SNCA-201ENST00000336904 AZU1P20160 251 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms