RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 E9PLD3 99 aa17.39■□□□□ 0.38
NDEL1-201ENST00000334527 C9orf85Q96MD7 179 aa17.39■□□□□ 0.38
NDEL1-201ENST00000334527 PRADC1Q9BSG0 188 aa17.39■□□□□ 0.38
NDEL1-201ENST00000334527 J3QLI3 93 aa17.39■□□□□ 0.37
NDEL1-201ENST00000334527 VCYO14598 125 aa17.39■□□□□ 0.37
NDEL1-201ENST00000334527 KIR2DL4Q99706 377 aa17.39■□□□□ 0.37
NDEL1-201ENST00000334527 CRYGDP07320 174 aa17.38■□□□□ 0.37
NDEL1-201ENST00000334527 TRBV7-3A0A075B6L6 115 aa17.38■□□□□ 0.37
NDEL1-201ENST00000334527 TSHBP01222 138 aa17.38■□□□□ 0.37
NDEL1-201ENST00000334527 SPINK13Q1W4C9 94 aa17.38■□□□□ 0.37
NDEL1-201ENST00000334527 Q8N1Y9 231 aa17.38■□□□□ 0.37
NDEL1-201ENST00000334527 AGRNO00468 2067 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 SDHAF1A6NFY7 115 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 LGALS9O00182 355 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 LGALS1P09382 135 aaKnown RBP17.37■□□□□ 0.37
NDEL1-201ENST00000334527 C12orf74Q32Q52 190 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 DUX5Q96PT3 197 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 IGIPA6NJ69 53 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 RPL39P62891 51 aaKnown RBP17.37■□□□□ 0.37
NDEL1-201ENST00000334527 VPREB3Q9UKI3 123 aa17.37■□□□□ 0.37
NDEL1-201ENST00000334527 LINC01619G3V211 115 aa17.36■□□□□ 0.37
NDEL1-201ENST00000334527 SYT8Q8NBV8 401 aa17.36■□□□□ 0.37
NDEL1-201ENST00000334527 LINC01549A6NIU2 74 aa17.35■□□□□ 0.37
NDEL1-201ENST00000334527 IGLL5B9A064 214 aa17.35■□□□□ 0.37
NDEL1-201ENST00000334527 IGHV1OR15-1A0A075B7D0 117 aa17.35■□□□□ 0.37
NDEL1-201ENST00000334527 SCGB2A2Q13296 93 aa17.35■□□□□ 0.37
NDEL1-201ENST00000334527 ZNF56Q15929 161 aa17.35■□□□□ 0.37
NDEL1-201ENST00000334527 IGLV4-69A0A075B6H9 119 aa17.34■□□□□ 0.37
NDEL1-201ENST00000334527 HOXD3P31249 432 aaPredicted RBP17.34■□□□□ 0.37
NDEL1-201ENST00000334527 EMP1P54849 157 aa17.34■□□□□ 0.37
NDEL1-201ENST00000334527 MYO18BQ8IUG5 2567 aa17.34■□□□□ 0.37
NDEL1-201ENST00000334527 TRBV6-5A0A0K0K1A5 114 aa17.33■□□□□ 0.37
NDEL1-201ENST00000334527 TRBV27A0A0K0K1C4 114 aa17.33■□□□□ 0.37
NDEL1-201ENST00000334527 C11orf86A6NJI1 115 aa17.33■□□□□ 0.37
NDEL1-201ENST00000334527 ZNF815PA8K554 130 aa17.33■□□□□ 0.37
NDEL1-201ENST00000334527 PMVKQ15126 192 aa17.33■□□□□ 0.37
NDEL1-201ENST00000334527 ANKRD17O75179 2603 aaKnown RBP17.33■□□□□ 0.37
NDEL1-201ENST00000334527 ELANEP08246 267 aa17.33■□□□□ 0.36
NDEL1-201ENST00000334527 CD300EQ496F6 205 aaPredicted RBP17.33■□□□□ 0.36
NDEL1-201ENST00000334527 TMEM141Q96I45 108 aa17.33■□□□□ 0.36
NDEL1-201ENST00000334527 ZNF702PQ9H963 129 aa17.33■□□□□ 0.36
NDEL1-201ENST00000334527 ZNF256Q9Y2P7 627 aaPredicted RBP17.33■□□□□ 0.36
NDEL1-201ENST00000334527 ZANQ9Y493 2812 aa17.33■□□□□ 0.36
NDEL1-201ENST00000334527 ZNF479Q96JC4 524 aa17.32■□□□□ 0.36
NDEL1-201ENST00000334527 RIPPLY3P57055 190 aa17.32■□□□□ 0.36
NDEL1-201ENST00000334527 Q6YL49 198 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 TIMM17AQ99595 171 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 FBN2P35556 2912 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 M0QY20 66 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 COX6B1P14854 86 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 PAPPA-AS1Q5QFB9 102 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 MORN3Q6PF18 240 aaPredicted RBP17.31■□□□□ 0.36
NDEL1-201ENST00000334527 UBE2E2Q96LR5 201 aa17.31■□□□□ 0.36
NDEL1-201ENST00000334527 SCGB1D4Q6XE38 83 aa17.3■□□□□ 0.36
NDEL1-201ENST00000334527 DOPEY2Q9Y3R5 2298 aa17.3■□□□□ 0.36
NDEL1-201ENST00000334527 FOXI2Q6ZQN5 318 aa17.3■□□□□ 0.36
NDEL1-201ENST00000334527 USP9YO00507 2555 aaPredicted RBP17.3■□□□□ 0.36
NDEL1-201ENST00000334527 KLHL30-AS1Q8NEE0 82 aa17.29■□□□□ 0.36
NDEL1-201ENST00000334527 PLEKHB2Q96CS7 222 aa17.29■□□□□ 0.36
NDEL1-201ENST00000334527 BEX4Q9NWD9 120 aaPredicted RBP17.29■□□□□ 0.36
NDEL1-201ENST00000334527 HERVK_113P61574 105 aa17.29■□□□□ 0.36
NDEL1-201ENST00000334527 A0A1B0GWB2 263 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 G3V4G9 280 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 HOXA3O43365 443 aaPredicted RBP17.28■□□□□ 0.36
NDEL1-201ENST00000334527 FSHBP01225 129 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 ZNF876PQ49A33 203 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 AMTNQ6UX39 209 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 TCTEX1D4Q5JR98 221 aa17.28■□□□□ 0.36
NDEL1-201ENST00000334527 TRPT1Q86TN4 253 aaKnown RBP17.28■□□□□ 0.36
NDEL1-201ENST00000334527 PRB1P04280 392 aa17.27■□□□□ 0.36
NDEL1-201ENST00000334527 POLQO75417 2590 aa17.26■□□□□ 0.35
NDEL1-201ENST00000334527 IGHV4-31P0DP07 118 aa17.26■□□□□ 0.35
NDEL1-201ENST00000334527 RRN3P1Q2M238 152 aa17.26■□□□□ 0.35
NDEL1-201ENST00000334527 TRGV11A0A075B6L2 103 aa17.25■□□□□ 0.35
NDEL1-201ENST00000334527 TMEM170BQ5T4T1 132 aa17.25■□□□□ 0.35
NDEL1-201ENST00000334527 MXRA5Q9NR99 2828 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 KNCNA6PVL3 124 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 SLURP1P55000 103 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 DEFB136Q30KP8 78 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 NSUN5P1Q3KNT7 163 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 RNF152Q8N8N0 203 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 ZNRF2Q8NHG8 242 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 SRSF9Q13242 221 aaKnown RBP eCLIP17.24■□□□□ 0.35
NDEL1-201ENST00000334527 RHOHQ15669 191 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 SORL1Q92673 2214 aa17.24■□□□□ 0.35
NDEL1-201ENST00000334527 C18orf65Q6ZTR6 163 aa17.23■□□□□ 0.35
NDEL1-201ENST00000334527 RBMY1A1P0DJD3 496 aaKnown RBP17.23■□□□□ 0.35
NDEL1-201ENST00000334527 RBMY1CP0DJD4 496 aa17.23■□□□□ 0.35
NDEL1-201ENST00000334527 RPL24P83731 157 aaKnown RBP17.23■□□□□ 0.35
NDEL1-201ENST00000334527 RBMY1FQ15415 496 aaKnown RBP17.23■□□□□ 0.35
NDEL1-201ENST00000334527 ACACBO00763 2458 aa17.22■□□□□ 0.35
NDEL1-201ENST00000334527 H3BMG7 143 aa17.22■□□□□ 0.35
NDEL1-201ENST00000334527 HTN1P15515 57 aa17.22■□□□□ 0.35
NDEL1-201ENST00000334527 OPRPNQ99935 248 aaPredicted RBP17.22■□□□□ 0.35
NDEL1-201ENST00000334527 TMEM238LA0A1B0GVL6 79 aa17.21■□□□□ 0.35
NDEL1-201ENST00000334527 A6NJY4 79 aa17.21■□□□□ 0.35
NDEL1-201ENST00000334527 P0DMU3 169 aa17.21■□□□□ 0.35
NDEL1-201ENST00000334527 FAM231AP0DMU4 169 aa17.21■□□□□ 0.35
NDEL1-201ENST00000334527 FAM231CP0DMU5 169 aa17.21■□□□□ 0.35
NDEL1-201ENST00000334527 CENPEQ02224 2701 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms