RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 IGLL5B9A064 214 aa8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 HOXA3O43365 443 aaPredicted RBP8.77□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 DUX5Q96PT3 197 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 IGHV4OR15-8A0A075B7B6 117 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 A0A087WW49 117 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 RIPPLY3P57055 190 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 MAPK1IP1LQ8NDC0 245 aa8.76□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ITPR1Q14643 2758 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 SORL1Q92673 2214 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 NXPH4O95158 308 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 RPL39P62891 51 aaKnown RBP8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 CFHR3Q02985 330 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 A0A0J9YX75 114 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 Q8N1Y9 231 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 MDFICQ9P1T7 246 aa8.75□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LGALS1P09382 135 aaKnown RBP8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 KHDC1LQ5JSQ8 128 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 RPL32P62910 135 aaKnown RBP8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 CELSR1Q9NYQ6 3014 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 H3BMG7 143 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 AGRNO00468 2067 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 IGHV3-16A0A0C4DH30 117 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 C11orf86A6NJI1 115 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 G3V4G9 280 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 J3QLI3 93 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 RRN3P1Q2M238 152 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TRPT1Q86TN4 253 aaKnown RBP8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 KLHL30-AS1Q8NEE0 82 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 F8W1H4 67 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LGALS3P17931 250 aaKnown RBP8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 PHLDA1Q8WV24 401 aaPredicted RBP8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 K7EQG2 157 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 APOMO95445 188 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 COX6B1P14854 86 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ZNF580Q9UK33 172 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 VPREB3Q9UKI3 123 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TRBV7-3A0A075B6L6 115 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 ELANEP08246 267 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LINC00315P59091 139 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 AMTNQ6UX39 209 aa8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 USP9XQ93008 2570 aaPredicted RBP8.72□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 RNF223E7ERA6 249 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LINC01619G3V211 115 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LGALS9O00182 355 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 LYRM7Q5U5X0 104 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TRBV27A0A0K0K1C4 114 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 POM121L12Q8N7R1 296 aa8.71□□□□□ -1.01
CSPG4P4Y-201ENST00000333235 IGIPA6NJ69 53 aa8.71□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 TCTEX1D4Q5JR98 221 aa8.71□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 C9orf85Q96MD7 179 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 VCX2Q9H322 139 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 POLQO75417 2590 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 BEX4Q9NWD9 120 aaPredicted RBP8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 FLNCQ14315 2725 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 RHOHQ15669 191 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 UBE2E2Q96LR5 201 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 MUC4Q99102 2169 aa8.7□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 I3L3M4 83 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 M0QY20 66 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 CRYGDP07320 174 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 DEFB131AP59861 70 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 WFDC2Q14508 124 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 MTURNQ8N3F0 131 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 DUX3Q96PT4 197 aa8.69□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 TSHBP01222 138 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 DYNLRB2Q8TF09 96 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 TNFRSF18Q9Y5U5 241 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 CFAP46Q8IYW2 2715 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 NAV2Q8IVL1 2488 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 J3QQQ9 107 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 CENPEQ02224 2701 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 MYO9AB2RTY4 2548 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 LRRK2Q5S007 2527 aa8.68□□□□□ -1.02
CSPG4P4Y-201ENST00000333235 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms