RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 GPHB5Q86YW7 130 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 DMXL2Q8TDJ6 3036 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 CACNA1GO43497 2377 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 ATOX1O00244 68 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
SKA2-201ENST00000330137 TRBV6-5A0A0K0K1A5 114 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 BUB3O43684 328 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 IGHV4-39P01824 125 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 EMP1P54849 157 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 TMEM258P61165 79 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 HIST1H4AP62805 103 aaKnown RBP6.35□□□□□ -1.39
SKA2-201ENST00000330137 ADIPOQQ15848 244 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 PEMTQ9UBM1 199 aa6.35□□□□□ -1.39
SKA2-201ENST00000330137 ACACAQ13085 2346 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 CTSGP08311 255 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 RHOHQ15669 191 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 LINC00477Q96M19 166 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 TP53TG1Q9Y2A0 90 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 ZFHX4Q86UP3 3567 aa6.34□□□□□ -1.39
SKA2-201ENST00000330137 URB1O60287 2271 aaKnown RBP6.34□□□□□ -1.39
SKA2-201ENST00000330137 ZNF22P17026 224 aaPredicted RBP6.34□□□□□ -1.4
SKA2-201ENST00000330137 MRAPQ8TCY5 172 aa6.34□□□□□ -1.4
SKA2-201ENST00000330137 TRBV27A0A0K0K1C4 114 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 PRAC2D3DTV9 90 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 TIMM17BO60830 172 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 DAND5Q8N907 189 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 DYNLRB1Q9NP97 96 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 APC2O95996 2303 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 A0A0J9YXY3 114 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 ELANEP08246 267 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 NSUN5P1Q3KNT7 163 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 ANKRD11Q6UB99 2663 aaPredicted RBP6.33□□□□□ -1.4
SKA2-201ENST00000330137 IGFL2Q6UWQ7 119 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 DCANP1Q8TF63 244 aa6.33□□□□□ -1.4
SKA2-201ENST00000330137 C14orf178Q8N769 122 aaPredicted RBP6.32□□□□□ -1.4
SKA2-201ENST00000330137 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
SKA2-201ENST00000330137 PHLDA3Q9Y5J5 127 aa6.32□□□□□ -1.4
SKA2-201ENST00000330137 EPG5Q9HCE0 2579 aa6.32□□□□□ -1.4
SKA2-201ENST00000330137 OOSP1A8MZH6 123 aa6.32□□□□□ -1.4
SKA2-201ENST00000330137 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
SKA2-201ENST00000330137 UBTD1Q9HAC8 227 aa6.32□□□□□ -1.4
SKA2-201ENST00000330137 ZZEF1O43149 2961 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 INTS1Q8N201 2190 aaKnown RBP6.31□□□□□ -1.4
SKA2-201ENST00000330137 CCL8P80075 99 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 LYPD2Q6UXB3 125 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 KIF25-AS1Q9Y6Z4 181 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 USP24Q9UPU5 2620 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 DSPP15924 2871 aaKnown RBP6.31□□□□□ -1.4
SKA2-201ENST00000330137 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 TRACP01848 142 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 C9orf139Q6ZV77 190 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 LITAFQ99732 161 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 CACNA1BQ00975 2339 aa6.31□□□□□ -1.4
SKA2-201ENST00000330137 OVOL1O14753 267 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 S100A4P26447 101 aaKnown RBP6.3□□□□□ -1.4
SKA2-201ENST00000330137 UBE2E1P51965 193 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 UCNP55089 124 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 MIAQ16674 131 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 COPS9Q8WXC6 57 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 U3KQE9 123 aa6.3□□□□□ -1.4
SKA2-201ENST00000330137 LOC107984640A0A0U1RRK4 108 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 H7C2G1 150 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 LINC00315P59091 139 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 IGFL4Q6B9Z1 124 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 MGPP08493 103 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 PF4V1P10720 104 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
SKA2-201ENST00000330137 SEM1Q6ZVN7 128 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 FAM19A4Q96LR4 140 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 DPM3Q9P2X0 92 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 I3L3M4 83 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 ITLN2Q8WWU7 325 aaPredicted RBP6.29□□□□□ -1.4
SKA2-201ENST00000330137 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
SKA2-201ENST00000330137 PKD1L2Q7Z442 2459 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 PRB4P10163 310 aaPredicted RBP6.28□□□□□ -1.4
SKA2-201ENST00000330137 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 RNF182Q8N6D2 247 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 ZFAND2AQ8N6M9 145 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 AHCTF1Q8WYP5 2266 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 PLXNB1O43157 2135 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 NBEAQ8NFP9 2946 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 FAM110DQ8TAY7 271 aaPredicted RBP6.28□□□□□ -1.4
SKA2-201ENST00000330137 CCL17Q92583 94 aa6.28□□□□□ -1.4
SKA2-201ENST00000330137 BEX4Q9NWD9 120 aaPredicted RBP6.28□□□□□ -1.4
SKA2-201ENST00000330137 CLPSL1A2RUU4 121 aa6.27□□□□□ -1.41
SKA2-201ENST00000330137 K7ENP7 123 aa6.27□□□□□ -1.41
SKA2-201ENST00000330137 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
SKA2-201ENST00000330137 CEMP1Q6PRD7 247 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms