RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 GAGE12JA6NER3 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 ZNF415Q09FC8 603 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE4Q13068 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE5Q13069 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE13Q4V321 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 ZNF747Q9BV97 191 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE7O76087 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 INSP01308 110 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 LGALS1P09382 135 aaKnown RBP9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 K7EMI3 77 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 CD5LO43866 347 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 CRIP1P50238 77 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 Q6ZQT7 251 aa9.05□□□□□ -0.96
DDR1-223ENST00000324771 ZNF48Q96MX3 618 aaPredicted RBP9.05□□□□□ -0.96
DDR1-223ENST00000324771 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 MLST8Q9BVC4 326 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 A0A096LPF7 62 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 SMIM2Q9BVW6 85 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 CCL24O00175 119 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
DDR1-223ENST00000324771 PCP2Q8IVA1 136 aa9.04□□□□□ -0.96
DDR1-223ENST00000324771 TMEM61Q8N0U2 210 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 Q8N8P6 123 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 SMAD5-AS1Q9Y6J3 95 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 PTPRBP23467 1997 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 KALRNO60229 2985 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 TMEM101Q96IK0 257 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 SS18L2Q9UHA2 77 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 BBC3Q96PG8 261 aaPredicted RBP9.03□□□□□ -0.96
DDR1-223ENST00000324771 FLNCQ14315 2725 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 ZNRF2Q8NHG8 242 aa9.03□□□□□ -0.96
DDR1-223ENST00000324771 ETDBQ3ZM63 59 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 RNF114Q9Y508 228 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 C2orf70A6NJV1 201 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 EDN2P20800 178 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 ADAMTSL5Q6ZMM2 481 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 MDFICQ9P1T7 246 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
DDR1-223ENST00000324771 RPL13AP40429 203 aaKnown RBP9.02□□□□□ -0.97
DDR1-223ENST00000324771 RPL36AP83881 106 aaKnown RBP9.02□□□□□ -0.97
DDR1-223ENST00000324771 RPL36ALQ969Q0 106 aaKnown RBP9.02□□□□□ -0.97
DDR1-223ENST00000324771 TNRC6BQ9UPQ9 1833 aaKnown RBP9.01□□□□□ -0.97
DDR1-223ENST00000324771 CRYBA4P53673 196 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 TACC2O95359 2948 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 PRM2P04554 102 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 SEC11AP67812 179 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
DDR1-223ENST00000324771 EBI3Q14213 229 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 MBD6Q96DN6 1003 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 C20orf173Q96LM9 149 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 Q8N1Y9 231 aa9.01□□□□□ -0.97
DDR1-223ENST00000324771 SPINK8P0C7L1 97 aa9□□□□□ -0.97
DDR1-223ENST00000324771 BVES-AS1Q5T3Y7 98 aa9□□□□□ -0.97
DDR1-223ENST00000324771 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
DDR1-223ENST00000324771 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
DDR1-223ENST00000324771 ESM1Q9NQ30 184 aa9□□□□□ -0.97
DDR1-223ENST00000324771 GAGE12HA6NDE8 117 aa9□□□□□ -0.97
DDR1-223ENST00000324771 H3BUA1 57 aa9□□□□□ -0.97
DDR1-223ENST00000324771 C18orf65Q6ZTR6 163 aa9□□□□□ -0.97
DDR1-223ENST00000324771 OR9G4Q8NGQ1 327 aa9□□□□□ -0.97
DDR1-223ENST00000324771 DLX4Q92988 240 aaPredicted RBP9□□□□□ -0.97
DDR1-223ENST00000324771 KLF5Q13887 457 aaPredicted RBP8.99□□□□□ -0.97
DDR1-223ENST00000324771 CHAC1Q9BUX1 264 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 IGHV4-31P0DP07 118 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
DDR1-223ENST00000324771 Q8N6K4 173 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 ZNF479Q96JC4 524 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 TEX48A0A1B0GUV7 120 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 IGLV2-11P01706 119 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 MYCNOSP40205 109 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 CFAP161Q6P656 301 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 DCHS1Q96JQ0 3298 aa8.99□□□□□ -0.97
DDR1-223ENST00000324771 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
DDR1-223ENST00000324771 U3KQE9 123 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 A0A1B0GXF2 115 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 COX6CP09669 75 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 B5MCH6 92 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 K7ERJ3 54 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
DDR1-223ENST00000324771 TRPT1Q86TN4 253 aaKnown RBP8.98□□□□□ -0.97
DDR1-223ENST00000324771 PRSS29PA6NIE9 313 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 TAX1BP3O14907 124 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 PLNP26678 52 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 RBAKDNA6NC62 111 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 DEFB121Q5J5C9 76 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 C9orf47Q6ZRZ4 202 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 PRADC1Q9BSG0 188 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 MUC4Q99102 2169 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms