RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 FXYD2P54710 66 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 KRTAP10-9P60411 292 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 AMTNQ6UX39 209 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 NEGR1Q7Z3B1 354 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 TMEM141Q96I45 108 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 JMJD8Q96S16 334 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 TRBV27A0A0K0K1C4 114 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 UFSP1Q6NVU6 142 aa16.57■□□□□ 0.24
PNKP-201ENST00000322344 SDHAF1A6NFY7 115 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 K7EP34 96 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 RIPPLY3P57055 190 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 PAPPA-AS1Q5QFB9 102 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 RAB37Q96AX2 223 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 TP53TG1Q9Y2A0 90 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 CSPG4Q6UVK1 2322 aa16.56■□□□□ 0.24
PNKP-201ENST00000322344 TRAV2A0A0B4J234 112 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 E9PLD3 99 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 MYMXA0A1B0GTQ4 84 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 IGIPA6NJ69 53 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 FAM74A4Q5TZK3 123 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 TIMM17AQ99595 171 aa16.55■□□□□ 0.24
PNKP-201ENST00000322344 A0A1W2PPM0 123 aa16.54■□□□□ 0.24
PNKP-201ENST00000322344 CRYGDP07320 174 aa16.54■□□□□ 0.24
PNKP-201ENST00000322344 GAGE12BA1L429 117 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 ZNF56Q15929 161 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 TRPT1Q86TN4 253 aaKnown RBP16.53■□□□□ 0.24
PNKP-201ENST00000322344 PEMTQ9UBM1 199 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 M0QY20 66 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 SLURP1P55000 103 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 CST9LQ9H4G1 147 aa16.53■□□□□ 0.24
PNKP-201ENST00000322344 A8MTW9 85 aa16.52■□□□□ 0.24
PNKP-201ENST00000322344 PMVKQ15126 192 aa16.52■□□□□ 0.24
PNKP-201ENST00000322344 Q96MF0 132 aa16.52■□□□□ 0.24
PNKP-201ENST00000322344 ZNF256Q9Y2P7 627 aaPredicted RBP16.52■□□□□ 0.24
PNKP-201ENST00000322344 CR1P17927 2039 aa16.52■□□□□ 0.23
PNKP-201ENST00000322344 TSHBP01222 138 aa16.52■□□□□ 0.23
PNKP-201ENST00000322344 ACACBO00763 2458 aa16.51■□□□□ 0.23
PNKP-201ENST00000322344 FABP2P12104 132 aa16.51■□□□□ 0.23
PNKP-201ENST00000322344 RHOHQ15669 191 aa16.51■□□□□ 0.23
PNKP-201ENST00000322344 OR5A1Q8NGJ0 315 aa16.51■□□□□ 0.23
PNKP-201ENST00000322344 C4orf3Q8WVX3 66 aa16.51■□□□□ 0.23
PNKP-201ENST00000322344 SAMD5Q5TGI4 173 aa16.5■□□□□ 0.23
PNKP-201ENST00000322344 RBX1P62877 108 aa16.5■□□□□ 0.23
PNKP-201ENST00000322344 ZNF876PQ49A33 203 aa16.5■□□□□ 0.23
PNKP-201ENST00000322344 MORN3Q6PF18 240 aaPredicted RBP16.5■□□□□ 0.23
PNKP-201ENST00000322344 PHLDA1Q8WV24 401 aaPredicted RBP16.5■□□□□ 0.23
PNKP-201ENST00000322344 HIST1H4GQ99525 98 aa16.5■□□□□ 0.23
PNKP-201ENST00000322344 NAA38Q9BRA0 125 aaKnown RBP16.5■□□□□ 0.23
PNKP-201ENST00000322344 PRADC1Q9BSG0 188 aa16.5■□□□□ 0.23
PNKP-201ENST00000322344 PRRC2AP48634 2157 aaKnown RBP16.49■□□□□ 0.23
PNKP-201ENST00000322344 CELSR2Q9HCU4 2923 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 DEFB136Q30KP8 78 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 NSUN5P1Q3KNT7 163 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 C18orf65Q6ZTR6 163 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 TMEM86BQ8N661 226 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 NHP2Q9NX24 153 aaKnown RBP16.49■□□□□ 0.23
PNKP-201ENST00000322344 SPCS1Q9Y6A9 102 aa16.49■□□□□ 0.23
PNKP-201ENST00000322344 ANKRD17O75179 2603 aaKnown RBP16.48■□□□□ 0.23
PNKP-201ENST00000322344 DEFB131AP59861 70 aa16.48■□□□□ 0.23
PNKP-201ENST00000322344 HERVK_113P61574 105 aa16.48■□□□□ 0.23
PNKP-201ENST00000322344 TEX29Q8N6K0 151 aa16.48■□□□□ 0.23
PNKP-201ENST00000322344 TRBV7-3A0A075B6L6 115 aa16.48■□□□□ 0.23
PNKP-201ENST00000322344 KNCNA6PVL3 124 aa16.48■□□□□ 0.23
PNKP-201ENST00000322344 IGLV4-69A0A075B6H9 119 aa16.47■□□□□ 0.23
PNKP-201ENST00000322344 RPL39P62891 51 aaKnown RBP16.47■□□□□ 0.23
PNKP-201ENST00000322344 OCIAD2Q56VL3 154 aa16.47■□□□□ 0.23
PNKP-201ENST00000322344 MYO18BQ8IUG5 2567 aa16.47■□□□□ 0.23
PNKP-201ENST00000322344 H3BMM0 161 aa16.46■□□□□ 0.23
PNKP-201ENST00000322344 EDA2RQ9HAV5 297 aa16.46■□□□□ 0.23
PNKP-201ENST00000322344 C11orf86A6NJI1 115 aa16.46■□□□□ 0.23
PNKP-201ENST00000322344 K7ERJ3 54 aa16.45■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1A1P0DJD3 496 aaKnown RBP16.45■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1CP0DJD4 496 aa16.45■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1FQ15415 496 aaKnown RBP16.45■□□□□ 0.22
PNKP-201ENST00000322344 KRTAP1-3Q8IUG1 177 aa16.45■□□□□ 0.22
PNKP-201ENST00000322344 FBN2P35556 2912 aa16.45■□□□□ 0.22
PNKP-201ENST00000322344 ZNF815PA8K554 130 aa16.44■□□□□ 0.22
PNKP-201ENST00000322344 I3L3M4 83 aa16.44■□□□□ 0.22
PNKP-201ENST00000322344 SCGB2A2Q13296 93 aa16.44■□□□□ 0.22
PNKP-201ENST00000322344 C12orf74Q32Q52 190 aa16.43■□□□□ 0.22
PNKP-201ENST00000322344 PIK3CD-AS1Q5SR53 167 aa16.43■□□□□ 0.22
PNKP-201ENST00000322344 TMEM61Q8N0U2 210 aa16.43■□□□□ 0.22
PNKP-201ENST00000322344 SPAG8Q99932 426 aaPredicted RBP16.43■□□□□ 0.22
PNKP-201ENST00000322344 DYNLRB2Q8TF09 96 aa16.43■□□□□ 0.22
PNKP-201ENST00000322344 CD300EQ496F6 205 aaPredicted RBP16.42■□□□□ 0.22
PNKP-201ENST00000322344 KHDC1LQ5JSQ8 128 aa16.42■□□□□ 0.22
PNKP-201ENST00000322344 A0A1B0GWB2 263 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 K7ERU9 68 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 PTH2Q96A98 100 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 ZNF462Q96JM2 2506 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 USP24Q9UPU5 2620 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1BA6NDE4 496 aaKnown RBP16.41■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1EA6NEQ0 496 aaKnown RBP16.41■□□□□ 0.22
PNKP-201ENST00000322344 RBMY1DP0C7P1 496 aaKnown RBP16.41■□□□□ 0.22
PNKP-201ENST00000322344 C20orf203Q8NBC4 194 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 KLHL30-AS1Q8NEE0 82 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 DEFB104AQ8WTQ1 72 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 DLX4Q92988 240 aaPredicted RBP16.41■□□□□ 0.22
PNKP-201ENST00000322344 DUX3Q96PT4 197 aa16.41■□□□□ 0.22
PNKP-201ENST00000322344 UTP20O75691 2785 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms