RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 NPBQ8NG41 125 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 ESM1Q9NQ30 184 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 F8P00451 2351 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 AKAP13Q12802 2813 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 FRYLO94915 3013 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 TRPT1Q86TN4 253 aaKnown RBP12.7□□□□□ -0.38
CLIP4-201ENST00000320081 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 C5orf56Q8N8D9 126 aa12.7□□□□□ -0.38
CLIP4-201ENST00000320081 FXYD2P54710 66 aa12.69□□□□□ -0.38
CLIP4-201ENST00000320081 CKS1BP61024 79 aa12.69□□□□□ -0.38
CLIP4-201ENST00000320081 SPTBN5Q9NRC6 3674 aaKnown RBP12.69□□□□□ -0.38
CLIP4-201ENST00000320081 MYMXA0A1B0GTQ4 84 aa12.69□□□□□ -0.38
CLIP4-201ENST00000320081 NXPH4O95158 308 aa12.69□□□□□ -0.38
CLIP4-201ENST00000320081 C10orf99Q6UWK7 81 aa12.69□□□□□ -0.38
CLIP4-201ENST00000320081 TSSC4Q9Y5U2 329 aaPredicted RBP12.69□□□□□ -0.38
CLIP4-201ENST00000320081 C2orf70A6NJV1 201 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 SPINK8P0C7L1 97 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 GAGE6Q13070 117 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
CLIP4-201ENST00000320081 LRP4O75096 1905 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 C19orf71A6NCJ1 209 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 C2orf82Q6UX34 121 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 LINC01619G3V211 115 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 AZU1P20160 251 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 FRYQ5TBA9 3013 aa12.68□□□□□ -0.38
CLIP4-201ENST00000320081 PLEKHB2Q96CS7 222 aa12.67□□□□□ -0.38
CLIP4-201ENST00000320081 A0A0J9YXV3 536 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 MGAM2Q2M2H8 2515 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 A0A1W2PPM0 123 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 J3QQQ9 107 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 CCDC140Q96MF4 163 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 ATG2AQ2TAZ0 1938 aa12.66□□□□□ -0.38
CLIP4-201ENST00000320081 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 IGF2-ASQ6U949 168 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 I3L3M4 83 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 LINC01545Q5VT33 79 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 DAND5Q8N907 189 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 MDFICQ9P1T7 246 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 FGF6P10767 208 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 LMO4P61968 165 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 TMEM190Q8WZ59 177 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 MBD6Q96DN6 1003 aa12.65□□□□□ -0.38
CLIP4-201ENST00000320081 CRIP1P50238 77 aa12.65□□□□□ -0.39
CLIP4-201ENST00000320081 MORN3Q6PF18 240 aaPredicted RBP12.65□□□□□ -0.39
CLIP4-201ENST00000320081 Q8N1Y9 231 aa12.65□□□□□ -0.39
CLIP4-201ENST00000320081 RS1O15537 224 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 A0A087WW49 117 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 NOP10Q9NPE3 64 aaKnown RBP12.64□□□□□ -0.39
CLIP4-201ENST00000320081 C12orf74Q32Q52 190 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 Q6ZQT7 251 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 MLST8Q9BVC4 326 aa12.64□□□□□ -0.39
CLIP4-201ENST00000320081 CEMP1Q6PRD7 247 aaPredicted RBP12.63□□□□□ -0.39
CLIP4-201ENST00000320081 CEND1Q8N111 149 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 C10orf105Q8TEF2 133 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 LINC01559Q495D7 138 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 RBX1P62877 108 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 SUMO4Q6EEV6 95 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 COPS9Q8WXC6 57 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 ANAPC13Q9BS18 74 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 U3KQE9 123 aa12.63□□□□□ -0.39
CLIP4-201ENST00000320081 GAS8-AS1O95177 125 aa12.62□□□□□ -0.39
CLIP4-201ENST00000320081 VPREB3Q9UKI3 123 aa12.62□□□□□ -0.39
CLIP4-201ENST00000320081 BOD1L1Q8NFC6 3051 aa12.62□□□□□ -0.39
CLIP4-201ENST00000320081 TEX48A0A1B0GUV7 120 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 K7EP34 96 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 C16orf54Q6UWD8 224 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 ATP6V0BQ99437 205 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 AGRNO00468 2067 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 TRAV8-4A0A0B4J246 113 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 A0A0J9YY99 117 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 SCRT2Q9NQ03 307 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 P0DMU3 169 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 FAM231AP0DMU4 169 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 FAM231CP0DMU5 169 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 GATA3P23771 443 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 MRPL53Q96EL3 112 aaKnown RBP12.61□□□□□ -0.39
CLIP4-201ENST00000320081 LINC00574Q9H8X3 128 aa12.61□□□□□ -0.39
CLIP4-201ENST00000320081 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
CLIP4-201ENST00000320081 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 CRPP02741 224 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 PRM2P04554 102 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 MUC4Q99102 2169 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 GAGE2EQ4V326 116 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 GAGE2DQ9UEU5 116 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 F5H768 121 aa12.6□□□□□ -0.39
CLIP4-201ENST00000320081 TAX1BP3O14907 124 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 S100A7L2Q5SY68 101 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 INS-IGF2F8WCM5 200 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 LINC00310P59036 64 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 Q6ZS46 218 aa12.59□□□□□ -0.39
CLIP4-201ENST00000320081 RASL10AQ92737 203 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms