RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 KIR2DS2P43631 304 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 LOXL3P58215 753 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 HIGD1AQ9Y241 93 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 A0A1W2PPI3 338 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 ENSAO43768 121 aaKnown RBP7.2□□□□□ -1.26
CAPN3-201ENST00000318023 CD7P09564 240 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 LY6EQ16553 131 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 C9orf153Q5TBE3 101 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 LYRM7Q5U5X0 104 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 NDUFA11Q86Y39 141 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 M0R3E3 92 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 NPFFO15130 113 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 DEFB112Q30KQ8 113 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 KRTAP24-1Q3LI83 254 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 NOTCH1P46531 2555 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 TNFRSF6BO95407 300 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 ERHP84090 104 aaKnown RBP7.19□□□□□ -1.26
CAPN3-201ENST00000318023 WT1-ASQ06250 92 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 ZNF56Q15929 161 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 KLHL30-AS1Q8NEE0 82 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 ESM1Q9NQ30 184 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 HES1Q14469 280 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 TEX36Q5VZQ5 186 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 TMEM200BQ69YZ2 307 aa7.19□□□□□ -1.26
CAPN3-201ENST00000318023 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 LYZP61626 148 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 HERVK_113P63121 156 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 HCP5Q6MZN7 132 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 C10orf126Q8N4M7 172 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-201ENST00000318023 OTORQ9NRC9 128 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 DUSP14O95147 198 aaKnown RBP7.18□□□□□ -1.26
CAPN3-201ENST00000318023 CEMP1Q6PRD7 247 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-201ENST00000318023 MYOZ3Q8TDC0 251 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 PRADC1Q9BSG0 188 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 C11orf44Q8N8P7 122 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 TMEM75Q8N9X5 138 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
CAPN3-201ENST00000318023 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
CAPN3-201ENST00000318023 SH2D1AO60880 128 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 NDUFA7O95182 113 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 CFC1BP0CG36 223 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 CFC1P0CG37 223 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 RBAKDNA6NC62 111 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 IGHV4-59P01825 116 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 ELANEP08246 267 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 PLNP26678 52 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 BAALCQ8WXS3 180 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 TMEM101Q96IK0 257 aa7.17□□□□□ -1.26
CAPN3-201ENST00000318023 NXT2Q9NPJ8 142 aaKnown RBP7.17□□□□□ -1.26
CAPN3-201ENST00000318023 TRGV11A0A075B6L2 103 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 J3KT08 172 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 TIMM23O14925 209 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 IGLC6P0CF74 106 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 NDUFA4L2Q9NRX3 87 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 SAA4P35542 130 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 SPANXA1Q9NS26 97 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 TMEM219Q86XT9 240 aa7.16□□□□□ -1.26
CAPN3-201ENST00000318023 TRRAPQ9Y4A5 3859 aa7.15□□□□□ -1.26
CAPN3-201ENST00000318023 DNAJC9-AS1A6NH13 148 aa7.15□□□□□ -1.26
CAPN3-201ENST00000318023 Q6ZS46 218 aa7.15□□□□□ -1.26
CAPN3-201ENST00000318023 THAP8Q8NA92 274 aa7.15□□□□□ -1.26
CAPN3-201ENST00000318023 F5H768 121 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 F8VRH5 84 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 WIPF1O43516 503 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 IGHG4P01861 327 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.27
CAPN3-201ENST00000318023 Q8TAT8 98 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 SLC25A39Q9BZJ4 359 aaPredicted RBP7.15□□□□□ -1.27
CAPN3-201ENST00000318023 KAAG1Q9UBP8 84 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 SIGLEC9Q9Y336 463 aa7.15□□□□□ -1.27
CAPN3-201ENST00000318023 CGB1A6NKQ9 187 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 LINC01619G3V211 115 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 MFAP4P55083 255 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 PMVKQ15126 192 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 POU2AF1Q16633 256 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 DUX3Q96PT4 197 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 SIRPDQ9H106 197 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV1-69DA0A0B4J2H0 117 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV1-69P01742 117 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 MRPL20Q9BYC9 149 aaKnown RBP7.14□□□□□ -1.27
CAPN3-201ENST00000318023 PKD1L1Q8TDX9 2849 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 IGHV3-72A0A0B4J1Y9 119 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 H7C1H1 209 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 J3QLI3 93 aa7.14□□□□□ -1.27
CAPN3-201ENST00000318023 INS-IGF2F8WCM5 200 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 H3BMM0 161 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 H3BUX3 64 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 Q1RN00 199 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 UBE2WQ96B02 151 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 TPSG1Q9NRR2 321 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 PRO1854Q9UHT4 67 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 VWFP04275 2813 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 IGKV2-40A0A087WW87 121 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-201ENST00000318023 LGALS9O00182 355 aa7.13□□□□□ -1.27
CAPN3-201ENST00000318023 IGKV2D-40P01614 121 aaPredicted RBP7.13□□□□□ -1.27
CAPN3-201ENST00000318023 ZNF22P17026 224 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms