RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF561-AS1K7EIQ3 104 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 CCL24O00175 119 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
SPAST-201ENST00000315285 Q9H8V8 135 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 EDA2RQ9HAV5 297 aa10.6□□□□□ -0.71
SPAST-201ENST00000315285 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 K7EMT4 169 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 DAZAP2Q15038 168 aaPredicted RBP10.59□□□□□ -0.71
SPAST-201ENST00000315285 TRAV12-1A0A0B4J245 112 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 TAX1BP3O14907 124 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 GDF5OSQ5U4N7 250 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 Q8N1Y9 231 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 MLST8Q9BVC4 326 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 IGHG2P01859 326 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 DEFB121Q5J5C9 76 aa10.59□□□□□ -0.71
SPAST-201ENST00000315285 RPL39P62891 51 aaKnown RBP10.58□□□□□ -0.72
SPAST-201ENST00000315285 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 A0A096LPF7 62 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 RNF152Q8N8N0 203 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 PTPN13Q12923 2485 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 TEX48A0A1B0GUV7 120 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 APOC4P55056 127 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 ODF1Q14990 250 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 UNQ9165/PRO28630Q6UXU0 137 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 MED14OSP0DP75 135 aa10.58□□□□□ -0.72
SPAST-201ENST00000315285 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 A0A087WW49 117 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 TOMM6Q96B49 74 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 ZNF80P51504 273 aaPredicted RBP10.57□□□□□ -0.72
SPAST-201ENST00000315285 SH2D6Q7Z4S9 175 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 GPHB5Q86YW7 130 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 BAALCQ8WXS3 180 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 MBD6Q96DN6 1003 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 C3orf56Q8N813 242 aa10.57□□□□□ -0.72
SPAST-201ENST00000315285 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
SPAST-201ENST00000315285 LOXL1Q08397 574 aaPredicted RBP10.56□□□□□ -0.72
SPAST-201ENST00000315285 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 NRGNQ92686 78 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 TRBV12-3P01733 135 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 CLPSL2Q6UWE3 100 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 SPATA12Q7Z6I5 190 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 DEFB113Q30KQ7 82 aa10.56□□□□□ -0.72
SPAST-201ENST00000315285 A4D1N5 150 aa10.55□□□□□ -0.72
SPAST-201ENST00000315285 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
SPAST-201ENST00000315285 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
SPAST-201ENST00000315285 PRO3102Q9H379 93 aa10.55□□□□□ -0.72
SPAST-201ENST00000315285 RNASE8Q8TDE3 154 aaKnown RBP10.55□□□□□ -0.72
SPAST-201ENST00000315285 TIMM17AQ99595 171 aa10.55□□□□□ -0.72
SPAST-201ENST00000315285 E9PLD3 99 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 Q71RC1 249 aaPredicted RBP10.54□□□□□ -0.72
SPAST-201ENST00000315285 F8WEM9 126 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 XCL1P47992 114 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 PSCAO43653 123 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 MUSTN1Q8IVN3 82 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 PIEZO2Q9H5I5 2752 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 C9orf153Q5TBE3 101 aa10.54□□□□□ -0.72
SPAST-201ENST00000315285 J3QKU1 62 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 IFITM1P13164 125 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 KIAA1549Q9HCM3 1950 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 C11orf86A6NJI1 115 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 CRYGBP07316 175 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 LMO4P61968 165 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 HERV-K104P63124 156 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
SPAST-201ENST00000315285 LINC01548A6NM66 108 aa10.53□□□□□ -0.72
SPAST-201ENST00000315285 CRLF1O75462 422 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 IGLC6P0CF74 106 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 UBL5Q9BZL1 73 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 TMEM89A2RUT3 159 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 A6NDX4 124 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 K7EQD1 137 aa10.52□□□□□ -0.73
SPAST-201ENST00000315285 CEP192Q8TEP8 1941 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 C5orf38Q86SI9 138 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 TP53TG3Q9ULZ0 132 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 A0A0J9YY99 117 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 WFDC2Q14508 124 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 C15orf53Q8NAA6 179 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 HCFC1P51610 2035 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 ANKRD29Q8N6D5 301 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 IGHG4P01861 327 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 MDFICQ9P1T7 246 aa10.51□□□□□ -0.73
SPAST-201ENST00000315285 A0A0J9YX75 114 aa10.5□□□□□ -0.73
SPAST-201ENST00000315285 FSTL3O95633 263 aa10.5□□□□□ -0.73
SPAST-201ENST00000315285 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
SPAST-201ENST00000315285 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
SPAST-201ENST00000315285 C16orf74Q96GX8 76 aa10.5□□□□□ -0.73
SPAST-201ENST00000315285 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
SPAST-201ENST00000315285 PRB1P04280 392 aa10.5□□□□□ -0.73
SPAST-201ENST00000315285 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
SPAST-201ENST00000315285 HIVEP2P31629 2446 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 BAALC-AS2P0C853 105 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 IGF2RP11717 2491 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 MYCNOSP40205 109 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 Q6ZQT7 251 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 C2CD3Q4AC94 2353 aa10.49□□□□□ -0.73
SPAST-201ENST00000315285 HAMPP81172 84 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 LY6LH3BQJ8 138 aa10.48□□□□□ -0.73
SPAST-201ENST00000315285 MYO18BQ8IUG5 2567 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms