RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 LINC00305Q7Z4B0 112 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 ZNF709Q8N972 641 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 AP1S3Q96PC3 154 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 MRPL32Q9BYC8 188 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 TIMM9Q9Y5J7 89 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 A0A0D9SG52 128 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 KNCNA6PVL3 124 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 COX7A2P2O60397 106 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 JTBO76095 146 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 CD7P09564 240 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 FABP4P15090 132 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 NDUFV3P56181 108 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 LYRM7Q5U5X0 104 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 RPL7L1Q6DKI1 246 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 TRPT1Q86TN4 253 aaKnown RBP6.07□□□□□ -1.44
CHD6-201ENST00000309279 GTSCR1Q86UQ5 136 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 VAMP8Q9BV40 100 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 SCRT1Q9BWW7 348 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 CYTL1Q9NRR1 136 aa6.07□□□□□ -1.44
CHD6-201ENST00000309279 IGKV3-7A0A075B6H7 116 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 ZNF705GA8MUZ8 300 aaPredicted RBP6.06□□□□□ -1.44
CHD6-201ENST00000309279 K7EQG2 157 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 SERF2P84101 59 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 TTC32Q5I0X7 151 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 MORN5Q5VZ52 161 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 Q6Q795 121 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 SEC11CQ9BY50 192 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 SLC25A22Q9H936 323 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 MRPS16Q9Y3D3 137 aaKnown RBP6.06□□□□□ -1.44
CHD6-201ENST00000309279 SMAD5-AS1Q9Y6J3 95 aa6.06□□□□□ -1.44
CHD6-201ENST00000309279 TRAV4A0A0B4J268 109 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 H3BQ15 152 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 P0DMU3 169 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 FAM231AP0DMU4 169 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 FAM231CP0DMU5 169 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 CMC4P56277 68 aaPredicted RBP6.05□□□□□ -1.44
CHD6-201ENST00000309279 ODF3L2Q3SX64 289 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 LGALSLQ3ZCW2 172 aaPredicted RBP6.05□□□□□ -1.44
CHD6-201ENST00000309279 GNPNAT1Q96EK6 184 aaPredicted RBP6.05□□□□□ -1.44
CHD6-201ENST00000309279 IGF2BP2-AS1Q96M15 143 aa6.05□□□□□ -1.44
CHD6-201ENST00000309279 COL7A1Q02388 2944 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 SOCS3O14543 225 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 NCR2O95944 276 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 RBMY1CP0DJD4 496 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
CHD6-201ENST00000309279 LCN15Q6UWW0 184 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 BPIFA4PQ86YQ2 179 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 FAM167A-AS1Q96KT0 104 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 TMEM14CQ9P0S9 112 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 LAMTOR3Q9UHA4 124 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 AGRNO00468 2067 aa6.04□□□□□ -1.44
CHD6-201ENST00000309279 KANTRA0A1W2PQU2 76 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 IGLC2P0DOY2 106 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 IGHV4-30-4P0DP06 118 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 ZC2HC1AQ96GY0 325 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 TMEM191AQ9H0A3 160 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 MAP6D1Q9H9H5 199 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 FUT9Q9Y231 359 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 PYGO1Q9Y3Y4 419 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 NBEAL2Q6ZNJ1 2754 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 ISLRO14498 428 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 PSMB3P49720 205 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 DAD1P61803 113 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 SNRPD3P62318 126 aaKnown RBP6.03□□□□□ -1.44
CHD6-201ENST00000309279 DEFB121Q5J5C9 76 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 LINC00322Q6ZN03 302 aaPredicted RBP6.03□□□□□ -1.44
CHD6-201ENST00000309279 ZNF493Q6ZR52 646 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 MIR17HGQ75NE6 70 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 RPP25LQ8N5L8 163 aaKnown RBP6.03□□□□□ -1.44
CHD6-201ENST00000309279 SLC25A2Q9BXI2 301 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 PAM16Q9Y3D7 125 aa6.03□□□□□ -1.44
CHD6-201ENST00000309279 TGP01266 2768 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 FAM236AA0A1B0GUQ0 79 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 FAM236BA0A1B0GV22 79 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 PAX4O43316 350 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 ZNF253O75346 499 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 SEC11BP0C7V7 166 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 ZNF688P0C7X2 276 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 CACNG7P62955 275 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 Q6AWC8 147 aa6.02□□□□□ -1.45
CHD6-201ENST00000309279 RBMY1BA6NDE4 496 aaKnown RBP6.01□□□□□ -1.45
CHD6-201ENST00000309279 RBMY1EA6NEQ0 496 aaKnown RBP6.01□□□□□ -1.45
CHD6-201ENST00000309279 RBMY1DP0C7P1 496 aaKnown RBP6.01□□□□□ -1.45
CHD6-201ENST00000309279 FRMD6-AS1P0C7T7 363 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 IFITM1P13164 125 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 TAS2R45P59539 299 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 DEFB131AP59861 70 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 PDE6HQ13956 83 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 KIAA1644Q3SXP7 199 aa6.01□□□□□ -1.45
CHD6-201ENST00000309279 CENPWQ5EE01 88 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms