RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 GAGE5Q13069 117 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE6Q13070 117 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 C16orf54Q6UWD8 224 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 Q6ZQT7 251 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 PTPRBP23467 1997 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 Q6ZUT4 128 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 COPS9Q8WXC6 57 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 NBEAQ8NFP9 2946 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 LY6LH3BQJ8 138 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 IFITM1P13164 125 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
SEC23A-201ENST00000307712 MSRB2Q9Y3D2 182 aa10.29□□□□□ -0.76
SEC23A-201ENST00000307712 ZFP36P26651 326 aaKnown RBP10.28□□□□□ -0.76
SEC23A-201ENST00000307712 I3L3M4 83 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 MRGPRG-AS1Q2M3A8 158 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 NRACQ8N912 160 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 RNF183Q96D59 192 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE7O76087 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE12FP0CL80 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE12GP0CL81 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE12IP0CL82 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 GAGE4Q13068 117 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 NEXN-AS1Q8NBZ9 246 aa10.28□□□□□ -0.76
SEC23A-201ENST00000307712 CCDC140Q96MF4 163 aa10.27□□□□□ -0.76
SEC23A-201ENST00000307712 CLUHP3Q96NS8 147 aa10.27□□□□□ -0.76
SEC23A-201ENST00000307712 UNQ9165/PRO28630Q6UXU0 137 aa10.27□□□□□ -0.77
SEC23A-201ENST00000307712 CCL19Q99731 98 aa10.27□□□□□ -0.77
SEC23A-201ENST00000307712 RNASE1P07998 156 aaKnown RBP10.27□□□□□ -0.77
SEC23A-201ENST00000307712 SYNJ2BPP57105 145 aa10.27□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV1OR15-1A0A075B7D0 117 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 TRBV7-9A0A0J9YWB2 115 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 ANKRD11Q6UB99 2663 aaPredicted RBP10.26□□□□□ -0.77
SEC23A-201ENST00000307712 ZFYVE26Q68DK2 2539 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 PIFOQ8TCI5 191 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV7-4-1A0A0J9YVY3 117 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 TRBV12-3P01733 135 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 ATP6V0E2Q8NHE4 81 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
SEC23A-201ENST00000307712 TRAV13-1A0A0B4J241 112 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 LINC01620Q4KN68 170 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 TCTEX1D4Q5JR98 221 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 TRBV7-3A0A075B6L6 115 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 TNFRSF13BO14836 293 aaPredicted RBP10.25□□□□□ -0.77
SEC23A-201ENST00000307712 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
SEC23A-201ENST00000307712 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV1-69P01742 117 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 LY6DQ14210 128 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 LEPROTO15243 131 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
SEC23A-201ENST00000307712 A0A0J9YY99 117 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 PRIMA1Q86XR5 153 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 Q8NA96 180 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 ODF3BA8MYP8 253 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
SEC23A-201ENST00000307712 ZMAT4Q9H898 229 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 DEFB131AP59861 70 aa10.23□□□□□ -0.77
SEC23A-201ENST00000307712 CFAP126Q5VTH2 177 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 USP9YO00507 2555 aaPredicted RBP10.22□□□□□ -0.77
SEC23A-201ENST00000307712 IGHV3-53P01767 116 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 BLCAPP62952 87 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 PRR9Q5T870 116 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 SETD2Q9BYW2 2564 aaPredicted RBP10.22□□□□□ -0.77
SEC23A-201ENST00000307712 TMEM101Q96IK0 257 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 K7ENP7 123 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 XGP55808 180 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 TIMM17AQ99595 171 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 WDFY4Q6ZS81 3184 aa10.22□□□□□ -0.77
SEC23A-201ENST00000307712 RHOHQ15669 191 aa10.21□□□□□ -0.77
SEC23A-201ENST00000307712 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.77
SEC23A-201ENST00000307712 C5orf56Q8N8D9 126 aa10.21□□□□□ -0.78
SEC23A-201ENST00000307712 AJUBAQ96IF1 538 aa10.21□□□□□ -0.78
SEC23A-201ENST00000307712 PRSS47A8MTI9 375 aa10.21□□□□□ -0.78
SEC23A-201ENST00000307712 ZFAND2AQ8N6M9 145 aa10.21□□□□□ -0.78
SEC23A-201ENST00000307712 F8W735 103 aaPredicted RBP10.2□□□□□ -0.78
SEC23A-201ENST00000307712 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
SEC23A-201ENST00000307712 SLC25A29Q8N8R3 303 aa10.2□□□□□ -0.78
SEC23A-201ENST00000307712 DAND5Q8N907 189 aa10.2□□□□□ -0.78
SEC23A-201ENST00000307712 MDFICQ9P1T7 246 aa10.2□□□□□ -0.78
SEC23A-201ENST00000307712 ZNF415Q09FC8 603 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 PCSK5Q92824 1860 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 RAI1Q7Z5J4 1906 aaPredicted RBP10.19□□□□□ -0.78
SEC23A-201ENST00000307712 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.19□□□□□ -0.78
SEC23A-201ENST00000307712 IGKV2-29A2NJV5 120 aaPredicted RBP10.19□□□□□ -0.78
SEC23A-201ENST00000307712 Q6ZS46 218 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 Q8N1Y9 231 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 TLN2Q9Y4G6 2542 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
SEC23A-201ENST00000307712 LINC00158P58513 81 aa10.19□□□□□ -0.78
SEC23A-201ENST00000307712 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
SEC23A-201ENST00000307712 UBE2E2Q96LR5 201 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms