RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 RPL39P62891 51 aaKnown RBP8.07□□□□□ -1.12
CLIP1-201ENST00000302528 WFDC2Q14508 124 aa8.07□□□□□ -1.12
CLIP1-201ENST00000302528 CASP8AP2Q9UKL3 1982 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 H3BT86 120 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 FOXI1Q12951 378 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 C14orf177Q52M58 125 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 AJUBAQ96IF1 538 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 A0A0U1RQV1 116 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
CLIP1-201ENST00000302528 Q6ZUT4 128 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 ZNF407Q9C0G0 2248 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 Q8N1Y9 231 aa8.06□□□□□ -1.12
CLIP1-201ENST00000302528 FHL1Q13642 323 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 SPTAN1Q13813 2472 aaKnown RBP8.05□□□□□ -1.12
CLIP1-201ENST00000302528 PRSS33Q8NF86 280 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 WFDC11Q8NEX6 87 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 SMAD5-AS1Q9Y6J3 95 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 CENPVL3A0A0U1RRI6 287 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 FXYD2P54710 66 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 C16orf54Q6UWD8 224 aa8.05□□□□□ -1.12
CLIP1-201ENST00000302528 CTSGP08311 255 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 MSRB1Q9NZV6 116 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 KAAG1Q9UBP8 84 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 DOCK11Q5JSL3 2073 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 USF3Q68DE3 2245 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 NACAE9PAV3 2078 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 SERP1Q9Y6X1 66 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 IGFL3Q6UXB1 125 aa8.04□□□□□ -1.12
CLIP1-201ENST00000302528 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 A0A087WZ39 114 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 WFDC10BQ8IUB3 73 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 TRAV26-1A0A087WT03 109 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 TEX49A0A1B0GTD5 131 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 THSD7BQ9C0I4 1608 aa8.03□□□□□ -1.12
CLIP1-201ENST00000302528 TCF20Q9UGU0 1960 aaKnown RBP8.02□□□□□ -1.12
CLIP1-201ENST00000302528 CNOT1A5YKK6 2376 aaKnown RBP8.02□□□□□ -1.12
CLIP1-201ENST00000302528 ANAPC1Q9H1A4 1944 aa8.02□□□□□ -1.12
CLIP1-201ENST00000302528 LINC00173Q6ZV60 143 aa8.02□□□□□ -1.12
CLIP1-201ENST00000302528 LYPD6Q86Y78 171 aa8.02□□□□□ -1.12
CLIP1-201ENST00000302528 TRPM7Q96QT4 1865 aa8.02□□□□□ -1.12
CLIP1-201ENST00000302528 IGHV4-30-2A0A087WSY4 118 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 WNK2Q9Y3S1 2297 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 C11orf86A6NJI1 115 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 NDUFC2-KCTD14E9PQ53 114 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 IGHV4-38-2P0DP08 117 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 HIST2H2BDQ6DRA6 164 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 TOMM6Q96B49 74 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 TANC1Q9C0D5 1861 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 E9PLD3 99 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 ROS1P08922 2347 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 IGLV1-44P01699 117 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 TTTY13Q9BZ97 58 aa8.02□□□□□ -1.13
CLIP1-201ENST00000302528 PLXND1Q9Y4D7 1925 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 IGHV1-58A0A0C4DH39 117 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 BLCAPP62952 87 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 Q8NFD4 153 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 HIGD1BQ9P298 99 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 PLXNA2O75051 1894 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 A0A0J9YWU9 116 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 PLXNA4Q9HCM2 1894 aa8.01□□□□□ -1.13
CLIP1-201ENST00000302528 IGHV7-81A0A0B4J1V7 117 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 UFSP1Q6NVU6 142 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 Q8N9W7 124 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 V9GYY9 64 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 ZNF503-AS2A6NEH8 195 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 ACACAQ13085 2346 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 IGHV4-61A0A0C4DH41 118 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 C2orf70A6NJV1 201 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 MYCNOSP40205 109 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 MED12Q93074 2177 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 GTF3C1Q12789 2109 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 IGKV1D-37A0A075B6S9 117 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 PLCE1Q9P212 2302 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 CTSZQ9UBR2 303 aa8□□□□□ -1.13
CLIP1-201ENST00000302528 IGKV1-17P01599 117 aa7.99□□□□□ -1.13
CLIP1-201ENST00000302528 A6NED7 52 aa7.99□□□□□ -1.13
CLIP1-201ENST00000302528 THADAQ6YHU6 1953 aa7.99□□□□□ -1.13
CLIP1-201ENST00000302528 NFE4Q86UQ8 179 aa7.99□□□□□ -1.13
CLIP1-201ENST00000302528 C11orf45Q8TAV5 145 aa7.99□□□□□ -1.13
CLIP1-201ENST00000302528 C1orf147Q96MC9 270 aaPredicted RBP7.99□□□□□ -1.13
CLIP1-201ENST00000302528 G3V4G9 280 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 I3L2K1 104 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 PTH2Q96A98 100 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 FAM215AQ9Y5M1 114 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 PKDREJQ9NTG1 2253 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 IGLV11-55A0A075B6I3 123 aa7.98□□□□□ -1.13
CLIP1-201ENST00000302528 FRMPD3Q5JV73 1810 aa7.97□□□□□ -1.13
CLIP1-201ENST00000302528 K7EIM0 57 aa7.97□□□□□ -1.13
CLIP1-201ENST00000302528 CREBBPQ92793 2442 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms