RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 IGIPA6NJ69 53 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 G3V4G9 280 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 KLHL30-AS1Q8NEE0 82 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 A0A0J9YX75 114 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 C11orf86A6NJI1 115 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 PPP1R17O96001 155 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 SYNJ2BPP57105 145 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 CD300EQ496F6 205 aaPredicted RBP10.12□□□□□ -0.79
BCCIP-202ENST00000299130 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
BCCIP-202ENST00000299130 ZNF580Q9UK33 172 aa10.12□□□□□ -0.79
BCCIP-202ENST00000299130 SPINK13Q1W4C9 94 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 Q8N1Y9 231 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 C9orf85Q96MD7 179 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 SDHAF1A6NFY7 115 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 K7EQG2 157 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 ZNF479Q96JC4 524 aa10.11□□□□□ -0.79
BCCIP-202ENST00000299130 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
BCCIP-202ENST00000299130 COX6B1P14854 86 aa10.1□□□□□ -0.79
BCCIP-202ENST00000299130 USP9XQ93008 2570 aaPredicted RBP10.1□□□□□ -0.79
BCCIP-202ENST00000299130 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
BCCIP-202ENST00000299130 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
BCCIP-202ENST00000299130 ZNF256Q9Y2P7 627 aaPredicted RBP10.1□□□□□ -0.79
BCCIP-202ENST00000299130 A0A096LNT2 108 aa10.09□□□□□ -0.79
BCCIP-202ENST00000299130 TMEM238C9JI98 176 aa10.09□□□□□ -0.79
BCCIP-202ENST00000299130 LGALS9O00182 355 aa10.09□□□□□ -0.79
BCCIP-202ENST00000299130 VCYO14598 125 aa10.09□□□□□ -0.79
BCCIP-202ENST00000299130 FOXI2Q6ZQN5 318 aa10.09□□□□□ -0.79
BCCIP-202ENST00000299130 OPRPNQ99935 248 aaPredicted RBP10.09□□□□□ -0.79
BCCIP-202ENST00000299130 TGFAP01135 160 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 LINC01356Q8N9X3 169 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 LINC01619G3V211 115 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 H3BMG7 143 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 RPL24P83731 157 aaKnown RBP10.08□□□□□ -0.8
BCCIP-202ENST00000299130 WFDC2Q14508 124 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 MTURNQ8N3F0 131 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 DOPEY2Q9Y3R5 2298 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 DOPEY1Q5JWR5 2465 aa10.08□□□□□ -0.8
BCCIP-202ENST00000299130 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 A0A1B0GWB2 263 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 M0QY20 66 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 GATA3P23771 443 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 SNRPD3P62318 126 aaKnown RBP10.07□□□□□ -0.8
BCCIP-202ENST00000299130 PMVKQ15126 192 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 ZNF56Q15929 161 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 RRN3P1Q2M238 152 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 ZNRF2Q8NHG8 242 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 FBN2P35556 2912 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 TRBV27A0A0K0K1C4 114 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 SCGB2A2Q13296 93 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 IGSF10Q6WRI0 2623 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 SORL1Q92673 2214 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
BCCIP-202ENST00000299130 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
BCCIP-202ENST00000299130 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
BCCIP-202ENST00000299130 SCGB1D4Q6XE38 83 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 ODF3Q96PU9 254 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 PRM2P04554 102 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 HOXD3P31249 432 aaPredicted RBP10.06□□□□□ -0.8
BCCIP-202ENST00000299130 SAMD13Q5VXD3 122 aa10.06□□□□□ -0.8
BCCIP-202ENST00000299130 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 P0DMU3 169 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 FAM231AP0DMU4 169 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 FAM231CP0DMU5 169 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 ZNF702PQ9H963 129 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 DSCR9P59020 149 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
BCCIP-202ENST00000299130 BEX4Q9NWD9 120 aaPredicted RBP10.05□□□□□ -0.8
BCCIP-202ENST00000299130 KNCNA6PVL3 124 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 HOXA3O43365 443 aaPredicted RBP10.04□□□□□ -0.8
BCCIP-202ENST00000299130 PRB1P04280 392 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 DEFB136Q30KP8 78 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 TMEM89A2RUT3 159 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 HTN1P15515 57 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
BCCIP-202ENST00000299130 ZNF876PQ49A33 203 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 SH2D6Q7Z4S9 175 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
BCCIP-202ENST00000299130 A0A0J9YY99 117 aa10.03□□□□□ -0.8
BCCIP-202ENST00000299130 SLURP1P55000 103 aa10.03□□□□□ -0.8
BCCIP-202ENST00000299130 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
BCCIP-202ENST00000299130 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
BCCIP-202ENST00000299130 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.8
BCCIP-202ENST00000299130 PROK1P58294 105 aa10.02□□□□□ -0.8
BCCIP-202ENST00000299130 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.8
BCCIP-202ENST00000299130 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
BCCIP-202ENST00000299130 Q6YL49 198 aa10.02□□□□□ -0.81
BCCIP-202ENST00000299130 AMELXQ99217 191 aa10.02□□□□□ -0.81
BCCIP-202ENST00000299130 PRO0461Q9UI25 63 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms