RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 GAGE12GP0CL81 117 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 GAGE12IP0CL82 117 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 SRD5A1P18405 259 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 GAGE4Q13068 117 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 AGPAT4-IT1Q9H0P7 198 aa11.6□□□□□ -0.55
LRRTM1-201ENST00000295057 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 ZNF815PA8K554 130 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 TGFAP01135 160 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 SPANXN1Q5VSR9 72 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 RHODO00212 210 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 ANXA2RQ3ZCQ2 193 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 KLHL30-AS1Q8NEE0 82 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 KIR2DL4Q99706 377 aa11.59□□□□□ -0.55
LRRTM1-201ENST00000295057 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 RNF223E7ERA6 249 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 NDUFV3P56181 108 aaKnown RBP11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 UBE2D3P61077 147 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 UBE2D2P62837 147 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 SCGB1D4Q6XE38 83 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 A8MWV9 139 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 B4DSR2 109 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 H3BUX3 64 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 SLC25A16P16260 332 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 C15orf32Q32M92 178 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 LYRM7Q5U5X0 104 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 Q6ZS46 218 aa11.58□□□□□ -0.56
LRRTM1-201ENST00000295057 CCDC179H3BU77 68 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 H3BVH4 76 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 UBE2D1P51668 147 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 A0A096LNT2 108 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 IGHV3-49A0A0A0MS15 119 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 GAGE2BQ13066 116 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 RASL10AQ92737 203 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
LRRTM1-201ENST00000295057 SBSPONQ8IVN8 264 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 BAALCQ8WXS3 180 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 RAX2Q96IS3 184 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 CREBBPQ92793 2442 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 TCL1BO95988 128 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 BLCAPP62952 87 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 ANKRD29Q8N6D5 301 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 TOMM6Q96B49 74 aa11.56□□□□□ -0.56
LRRTM1-201ENST00000295057 TRBV20-1A0A075B6N2 111 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 J3KRW8 73 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 FAM110DQ8TAY7 271 aaPredicted RBP11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 DEFB104AQ8WTQ1 72 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 BUB3O43684 328 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 CLEC3BP05452 202 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 CD7P09564 240 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 EMP1P54849 157 aa11.55□□□□□ -0.56
LRRTM1-201ENST00000295057 BRI3O95415 125 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 SNCGO76070 127 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 DSCR9P59020 149 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 PRR9Q5T870 116 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 CLEC19AQ6UXS0 136 aa11.54□□□□□ -0.56
LRRTM1-201ENST00000295057 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 M0R381 172 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 IGF1P05019 195 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 TTC32Q5I0X7 151 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 TNFRSF18Q9Y5U5 241 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 RBAKDNA6NC62 111 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 IFITM1P13164 125 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 NDUFA11Q86Y39 141 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 LINC01356Q8N9X3 169 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 CCDC140Q96MF4 163 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 ITPR3Q14573 2671 aa11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 PRRC2AP48634 2157 aaKnown RBP11.53□□□□□ -0.56
LRRTM1-201ENST00000295057 ZFAND3Q9H8U3 227 aa11.52□□□□□ -0.56
LRRTM1-201ENST00000295057 IGHV4-4A0A075B6R2 117 aa11.52□□□□□ -0.57
LRRTM1-201ENST00000295057 ASIPP42127 132 aa11.52□□□□□ -0.57
LRRTM1-201ENST00000295057 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
LRRTM1-201ENST00000295057 CUBNO60494 3623 aa11.52□□□□□ -0.57
LRRTM1-201ENST00000295057 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 TRAV4A0A0B4J268 109 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 C14orf178Q8N769 122 aaPredicted RBP11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 A6NDX4 124 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 IGHV4-59P01825 116 aa11.51□□□□□ -0.57
LRRTM1-201ENST00000295057 CRYGDP07320 174 aa11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 GCN1Q92616 2671 aaKnown RBP11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 A0A0J9YY99 117 aa11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 CFC1BP0CG36 223 aa11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 CFC1P0CG37 223 aa11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
LRRTM1-201ENST00000295057 C11orf86A6NJI1 115 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms