RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ANKRD39Q53RE8 183 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 SCRT2Q9NQ03 307 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 SH2D6Q7Z4S9 175 aa9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 LYPD6Q86Y78 171 aa9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 KLHL30-AS1Q8NEE0 82 aa9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 HIGD1BQ9P298 99 aa9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 RPL35AP18077 110 aaKnown RBP9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
SYNGAP1-201ENST00000293748 RBAKDNA6NC62 111 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 G3V318 75 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 KLK9Q9UKQ9 250 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 FSTL3O95633 263 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 DUX4L9Q6RFH8 374 aaPredicted RBP9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 CCDC168Q8NDH2 2452 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 CR1LQ2VPA4 569 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 Q6ZSR3 168 aa9.25□□□□□ -0.93
SYNGAP1-201ENST00000293748 CRLF1O75462 422 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 ZNRF2Q8NHG8 242 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 PRR14LQ5THK1 2151 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 DEFB130BP0DP73 79 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 DEFB130AP0DP74 79 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 NSUN5P1Q3KNT7 163 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 ASPHD1Q5U4P2 390 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 TAX1BP3O14907 124 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 TMEM258P61165 79 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 AGPAT4-IT1Q9H0P7 198 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
SYNGAP1-201ENST00000293748 DSCR8Q96T75 97 aa9.23□□□□□ -0.93
SYNGAP1-201ENST00000293748 SS18L2Q9UHA2 77 aa9.23□□□□□ -0.93
SYNGAP1-201ENST00000293748 PRSS47A8MTI9 375 aa9.23□□□□□ -0.93
SYNGAP1-201ENST00000293748 IGHV3-16A0A0C4DH30 117 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 IGHV1-69P01742 117 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 LY6G6DO95868 133 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 BAALC-AS2P0C853 105 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 IGHV4-31P0DP07 118 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 DYNAPQ8N1N2 210 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 IGFBPL1Q8WX77 278 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 GP9P14770 177 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 C17orf77Q96MU5 243 aa9.22□□□□□ -0.93
SYNGAP1-201ENST00000293748 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.93
SYNGAP1-201ENST00000293748 PRRC2AP48634 2157 aaKnown RBP9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 RBM3P98179 157 aaKnown RBP9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 SMIM20Q8N5G0 67 aa9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 IGHV7-4-1A0A0J9YVY3 117 aa9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 NXPH4O95158 308 aa9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 FXYD2P54710 66 aa9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 WFDC2Q14508 124 aa9.21□□□□□ -0.94
SYNGAP1-201ENST00000293748 DIAPH2-AS1Q14236 149 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 IGHV3-38A0A0C4DH36 116 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 HERV-K104P63124 156 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 CFHR4Q92496 578 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 PRRC2CQ9Y520 2896 aaKnown RBP9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 TRAV12-2A0A075B6T6 113 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 TINCRA0A1B0GVN0 87 aa9.2□□□□□ -0.94
SYNGAP1-201ENST00000293748 ATOX1O00244 68 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 LINC01620Q4KN68 170 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 H3BUA1 57 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 GATA1P15976 413 aaPredicted RBP9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 LMO4P61968 165 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 SUMO4Q6EEV6 95 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 ZZEF1O43149 2961 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 TRAV12-1A0A0B4J245 112 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 LINC01619G3V211 115 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 C11orf53Q8IXP5 236 aa9.19□□□□□ -0.94
SYNGAP1-201ENST00000293748 A4D1N5 150 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 FOXE3Q13461 319 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 RUSC1-AS1Q66K80 236 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 LHBP01229 141 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 FOXI1Q12951 378 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 FAM167A-AS1Q96KT0 104 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 Q9H8V8 135 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 G3V4G9 280 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 H0YGX0 51 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 PATE2Q6UY27 113 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 NKAPP1Q8N9T2 125 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
SYNGAP1-201ENST00000293748 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 TRAV25A0A0B4J276 109 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 IGKV1-17P01599 117 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 SPRNQ5BIV9 151 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 SLC25A29Q8N8R3 303 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 ATP6V0E2Q8NHE4 81 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 RNF114Q9Y508 228 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 SPEGQ15772 3267 aa9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 FGF23Q9GZV9 251 aaPredicted RBP9.17□□□□□ -0.94
SYNGAP1-201ENST00000293748 A0A0B4J2C4 111 aa9.16□□□□□ -0.94
SYNGAP1-201ENST00000293748 GTSF1Q8WW33 167 aa9.16□□□□□ -0.94
SYNGAP1-201ENST00000293748 GNRH2O43555 120 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms