RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 SUMO2P61956 95 aaKnown RBP14.27□□□□□ -0.12
BRAF-201ENST00000288602 IGHV3-16A0A0C4DH30 117 aa14.27□□□□□ -0.13
BRAF-201ENST00000288602 NEGR1Q7Z3B1 354 aa14.27□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1A1P0DJD3 496 aaKnown RBP14.26□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1CP0DJD4 496 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 CD28P10747 220 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 LINC00315P59091 139 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1FQ15415 496 aaKnown RBP14.26□□□□□ -0.13
BRAF-201ENST00000288602 KIF25-AS1Q9Y6Z4 181 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 DUSP14O95147 198 aaKnown RBP14.26□□□□□ -0.13
BRAF-201ENST00000288602 NXPH4O95158 308 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 PRM2P04554 102 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 FAM74A4Q5TZK3 123 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 DYNLRB2Q8TF09 96 aa14.26□□□□□ -0.13
BRAF-201ENST00000288602 NUDT3O95989 172 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 DEFB125Q8N687 156 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 RAX2Q96IS3 184 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 SMR3AQ99954 134 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 FOXC2Q99958 501 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 IGHV1OR15-1A0A075B7D0 117 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 TEX29Q8N6K0 151 aa14.25□□□□□ -0.13
BRAF-201ENST00000288602 CD300EQ496F6 205 aaPredicted RBP14.24□□□□□ -0.13
BRAF-201ENST00000288602 ERASQ7Z444 233 aa14.24□□□□□ -0.13
BRAF-201ENST00000288602 F5H697 171 aa14.24□□□□□ -0.13
BRAF-201ENST00000288602 ODF1Q14990 250 aa14.24□□□□□ -0.13
BRAF-201ENST00000288602 MPV17L2Q567V2 206 aa14.23□□□□□ -0.13
BRAF-201ENST00000288602 C9orf85Q96MD7 179 aa14.23□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1BA6NDE4 496 aaKnown RBP14.23□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1EA6NEQ0 496 aaKnown RBP14.23□□□□□ -0.13
BRAF-201ENST00000288602 RBMY1DP0C7P1 496 aaKnown RBP14.23□□□□□ -0.13
BRAF-201ENST00000288602 DEFB114Q30KQ6 69 aa14.23□□□□□ -0.13
BRAF-201ENST00000288602 OR4C5Q8NGB2 326 aa14.23□□□□□ -0.13
BRAF-201ENST00000288602 K7EP13 123 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 COX8AP10176 69 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 SUMO4Q6EEV6 95 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 H3BMM0 161 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 CITED2Q99967 270 aaPredicted RBP14.22□□□□□ -0.13
BRAF-201ENST00000288602 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 CSTL1Q9H114 145 aa14.22□□□□□ -0.13
BRAF-201ENST00000288602 NOTCH2Q04721 2471 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 CBY3A6NI87 242 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 HLA-DRB4P13762 266 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 VAMP3Q15836 100 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 MAP6D1Q9H9H5 199 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.13
BRAF-201ENST00000288602 NMUP48645 174 aa14.2□□□□□ -0.14
BRAF-201ENST00000288602 RNF151Q2KHN1 245 aa14.2□□□□□ -0.14
BRAF-201ENST00000288602 POM121L12Q8N7R1 296 aa14.2□□□□□ -0.14
BRAF-201ENST00000288602 LINC01006Q8NI28 216 aa14.2□□□□□ -0.14
BRAF-201ENST00000288602 CCL24O00175 119 aa14.19□□□□□ -0.14
BRAF-201ENST00000288602 ATP5LO75964 103 aa14.19□□□□□ -0.14
BRAF-201ENST00000288602 FGF6P10767 208 aa14.19□□□□□ -0.14
BRAF-201ENST00000288602 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 C2orf91Q6ZV80 131 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 PCP2Q8IVA1 136 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 TMEM160Q9NX00 188 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 MRPL35Q9NZE8 188 aaKnown RBP14.18□□□□□ -0.14
BRAF-201ENST00000288602 ORMDL2Q53FV1 153 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 HHLA3Q9XRX5 114 aa14.18□□□□□ -0.14
BRAF-201ENST00000288602 ZNF56Q15929 161 aa14.17□□□□□ -0.14
BRAF-201ENST00000288602 ZMAT4Q9H898 229 aa14.17□□□□□ -0.14
BRAF-201ENST00000288602 ZNF256Q9Y2P7 627 aaPredicted RBP14.17□□□□□ -0.14
BRAF-201ENST00000288602 IGKCP01834 107 aa14.17□□□□□ -0.14
BRAF-201ENST00000288602 CRYGDP07320 174 aa14.17□□□□□ -0.14
BRAF-201ENST00000288602 TTTY13Q9BZ97 58 aa14.17□□□□□ -0.14
BRAF-201ENST00000288602 IGKV2D-26A0A0A0MRZ7 120 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.16□□□□□ -0.14
BRAF-201ENST00000288602 COTL1Q14019 142 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 C2orf66Q6UXQ4 117 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 SYT8Q8NBV8 401 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 SCGB3A1Q96QR1 104 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 RNASE1P07998 156 aaKnown RBP14.16□□□□□ -0.14
BRAF-201ENST00000288602 GTSCR1Q86UQ5 136 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 TOMM6Q96B49 74 aa14.16□□□□□ -0.14
BRAF-201ENST00000288602 SETXQ7Z333 2677 aaKnown RBP14.15□□□□□ -0.14
BRAF-201ENST00000288602 HIVEP2P31629 2446 aa14.15□□□□□ -0.14
BRAF-201ENST00000288602 FHL3Q13643 280 aa14.15□□□□□ -0.14
BRAF-201ENST00000288602 IGHV3-73A0A0B4J1V6 119 aa14.15□□□□□ -0.14
BRAF-201ENST00000288602 TAX1BP3O14907 124 aa14.15□□□□□ -0.14
BRAF-201ENST00000288602 BVES-AS1Q5T3Y7 98 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 ZC2HC1BQ5TFG8 222 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 TRGV11A0A075B6L2 103 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 TRAV2A0A0B4J234 112 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 SDHAF1A6NFY7 115 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 DPM2O94777 84 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 PPP1R17O96001 155 aa14.14□□□□□ -0.15
BRAF-201ENST00000288602 MORN3Q6PF18 240 aaPredicted RBP14.14□□□□□ -0.15
BRAF-201ENST00000288602 POLR2KP53803 58 aaKnown RBP14.13□□□□□ -0.15
BRAF-201ENST00000288602 ODF3L2Q3SX64 289 aa14.13□□□□□ -0.15
BRAF-201ENST00000288602 BOD1L2Q8IYS8 172 aa14.13□□□□□ -0.15
BRAF-201ENST00000288602 JMJD1CQ15652 2540 aa14.13□□□□□ -0.15
BRAF-201ENST00000288602 A0A087WX48 190 aa14.13□□□□□ -0.15
BRAF-201ENST00000288602 A8MTW9 85 aa14.13□□□□□ -0.15
BRAF-201ENST00000288602 SPAG8Q99932 426 aaPredicted RBP14.13□□□□□ -0.15
BRAF-201ENST00000288602 TSSC4Q9Y5U2 329 aaPredicted RBP14.13□□□□□ -0.15
BRAF-201ENST00000288602 M0QY20 66 aa14.12□□□□□ -0.15
BRAF-201ENST00000288602 NOTCH3Q9UM47 2321 aa14.11□□□□□ -0.15
BRAF-201ENST00000288602 PROK1P58294 105 aa14.11□□□□□ -0.15
BRAF-201ENST00000288602 RPL39P62891 51 aaKnown RBP14.11□□□□□ -0.15
BRAF-201ENST00000288602 OTOGQ6ZRI0 2925 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms