RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 AP1S3Q96PC3 154 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 MAP1LC3CQ9BXW4 147 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 KIF25-AS1Q9Y6Z4 181 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 HBDP02042 147 aa15.39■□□□□ 0.05
YBX3-202ENST00000279550 MGPP08493 103 aa15.39■□□□□ 0.05
YBX3-202ENST00000279550 ODF3L2Q3SX64 289 aa15.39■□□□□ 0.05
YBX3-202ENST00000279550 Q8N8P6 123 aa15.39■□□□□ 0.05
YBX3-202ENST00000279550 NDUFAF3Q9BU61 184 aa15.39■□□□□ 0.05
YBX3-202ENST00000279550 NXT2Q9NPJ8 142 aaKnown RBP15.39■□□□□ 0.05
YBX3-202ENST00000279550 PRSS47A8MTI9 375 aa15.38■□□□□ 0.05
YBX3-202ENST00000279550 LINC00315P59091 139 aa15.38■□□□□ 0.05
YBX3-202ENST00000279550 PET117Q6UWS5 81 aa15.38■□□□□ 0.05
YBX3-202ENST00000279550 RASL10AQ92737 203 aa15.38■□□□□ 0.05
YBX3-202ENST00000279550 H0Y8G0 127 aa15.37■□□□□ 0.05
YBX3-202ENST00000279550 DEFB125Q8N687 156 aa15.37■□□□□ 0.05
YBX3-202ENST00000279550 RPL39LQ96EH5 51 aaKnown RBP15.37■□□□□ 0.05
YBX3-202ENST00000279550 POM121L12Q8N7R1 296 aa15.36■□□□□ 0.05
YBX3-202ENST00000279550 VWFP04275 2813 aa15.35■□□□□ 0.05
YBX3-202ENST00000279550 TRAV9-2A0A087WT02 112 aa15.35■□□□□ 0.05
YBX3-202ENST00000279550 INSL3P51460 131 aa15.35■□□□□ 0.05
YBX3-202ENST00000279550 PMCHL2Q9BQD1 86 aa15.35■□□□□ 0.05
YBX3-202ENST00000279550 CTAG1AP78358 180 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 C9orf66Q5T8R8 295 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 LINC01545Q5VT33 79 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 WFDC9Q8NEX5 89 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 C20orf202A1L168 122 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 FCER1GP30273 86 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 MIEN1Q9BRT3 115 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 TRRAPQ9Y4A5 3859 aa15.34■□□□□ 0.05
YBX3-202ENST00000279550 A0A087WWL8 130 aa15.33■□□□□ 0.04
YBX3-202ENST00000279550 PRM2P04554 102 aa15.33■□□□□ 0.04
YBX3-202ENST00000279550 ZNF705AQ6ZN79 300 aaPredicted RBP15.33■□□□□ 0.04
YBX3-202ENST00000279550 TRGV11A0A075B6L2 103 aa15.32■□□□□ 0.04
YBX3-202ENST00000279550 CBY3A6NI87 242 aa15.32■□□□□ 0.04
YBX3-202ENST00000279550 TCAPO15273 167 aa15.32■□□□□ 0.04
YBX3-202ENST00000279550 SMIM2Q9BVW6 85 aa15.32■□□□□ 0.04
YBX3-202ENST00000279550 IGLL1P15814 213 aa15.31■□□□□ 0.04
YBX3-202ENST00000279550 LURAP1LQ8IV03 231 aa15.31■□□□□ 0.04
YBX3-202ENST00000279550 IGLC3P0DOY3 106 aa15.31■□□□□ 0.04
YBX3-202ENST00000279550 SUMO4Q6EEV6 95 aa15.31■□□□□ 0.04
YBX3-202ENST00000279550 IFI27L1Q96BM0 104 aa15.31■□□□□ 0.04
YBX3-202ENST00000279550 hDV102S1A0JD36 115 aa15.3■□□□□ 0.04
YBX3-202ENST00000279550 SMIM17P0DL12 118 aa15.3■□□□□ 0.04
YBX3-202ENST00000279550 SUMO2P61956 95 aaKnown RBP15.3■□□□□ 0.04
YBX3-202ENST00000279550 C18orf15Q96N68 181 aa15.3■□□□□ 0.04
YBX3-202ENST00000279550 OR11H12B2RN74 326 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 HTN1P15515 57 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 BEAN1Q3B7T3 259 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 SYT8Q8NBV8 401 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 C20orf78Q9BR46 151 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 LAGE3Q14657 143 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 CLUHP3Q96NS8 147 aa15.29■□□□□ 0.04
YBX3-202ENST00000279550 COL6A5A8TX70 2615 aa15.28■□□□□ 0.04
YBX3-202ENST00000279550 STAB1Q9NY15 2570 aa15.28■□□□□ 0.04
YBX3-202ENST00000279550 CRYGDP07320 174 aa15.28■□□□□ 0.04
YBX3-202ENST00000279550 TRPT1Q86TN4 253 aaKnown RBP15.27■□□□□ 0.04
YBX3-202ENST00000279550 MDFIQ99750 246 aa15.27■□□□□ 0.04
YBX3-202ENST00000279550 EREGO14944 169 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 FAM74A4Q5TZK3 123 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 FAM110AQ9BQ89 295 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 INSP01308 110 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 LGALS9BQ3B8N2 356 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 ZNF876PQ49A33 203 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 LGALS9CQ6DKI2 356 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 NEGR1Q7Z3B1 354 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 STHQ8IWL8 128 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 XCL2Q9UBD3 114 aa15.26■□□□□ 0.03
YBX3-202ENST00000279550 F5H697 171 aa15.25■□□□□ 0.03
YBX3-202ENST00000279550 WIPF1O43516 503 aa15.25■□□□□ 0.03
YBX3-202ENST00000279550 CMC4P56277 68 aaPredicted RBP15.25■□□□□ 0.03
YBX3-202ENST00000279550 UQCR10Q9UDW1 63 aa15.25■□□□□ 0.03
YBX3-202ENST00000279550 LINC01587Q99440 93 aa15.24■□□□□ 0.03
YBX3-202ENST00000279550 LINC00467Q9BRT7 94 aa15.24■□□□□ 0.03
YBX3-202ENST00000279550 CSTL1Q9H114 145 aa15.24■□□□□ 0.03
YBX3-202ENST00000279550 WFDC10AQ9H1F0 79 aa15.24■□□□□ 0.03
YBX3-202ENST00000279550 MORN3Q6PF18 240 aaPredicted RBP15.23■□□□□ 0.03
YBX3-202ENST00000279550 C19orf73Q9NVV2 129 aa15.23■□□□□ 0.03
YBX3-202ENST00000279550 PPP1R17O96001 155 aa15.23■□□□□ 0.03
YBX3-202ENST00000279550 SNHG12Q9BXW3 62 aa15.23■□□□□ 0.03
YBX3-202ENST00000279550 TP73-AS1Q9UF72 201 aa15.23■□□□□ 0.03
YBX3-202ENST00000279550 GOLT1BQ9Y3E0 138 aa15.23■□□□□ 0.03
YBX3-202ENST00000279550 NUDT3O95989 172 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 ZNF415Q09FC8 603 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 ZNF56Q15929 161 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 C1orf158Q8N1D5 194 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 C11orf72Q8NBR9 251 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 ST20Q9HBF5 79 aa15.22■□□□□ 0.03
YBX3-202ENST00000279550 DKK2Q9UBU2 259 aa15.21■□□□□ 0.03
YBX3-202ENST00000279550 M0QY20 66 aa15.2■□□□□ 0.02
YBX3-202ENST00000279550 POLR2KP53803 58 aaKnown RBP15.2■□□□□ 0.02
YBX3-202ENST00000279550 RPL32P62910 135 aaKnown RBP15.2■□□□□ 0.02
YBX3-202ENST00000279550 Q6ZN92 141 aa15.2■□□□□ 0.02
YBX3-202ENST00000279550 NOTCH3Q9UM47 2321 aa15.2■□□□□ 0.02
YBX3-202ENST00000279550 ORMDL2Q53FV1 153 aa15.2■□□□□ 0.02
YBX3-202ENST00000279550 GTSCR1Q86UQ5 136 aa15.2■□□□□ 0.02
YBX3-202ENST00000279550 M0R2P5 195 aa15.19■□□□□ 0.02
YBX3-202ENST00000279550 AZU1P20160 251 aa15.19■□□□□ 0.02
YBX3-202ENST00000279550 ODF1Q14990 250 aa15.19■□□□□ 0.02
YBX3-202ENST00000279550 DEFB104AQ8WTQ1 72 aa15.19■□□□□ 0.02
YBX3-202ENST00000279550 TRBV6-5A0A0K0K1A5 114 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms