RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 APCSP02743 223 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 Q8N1Y9 231 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 NCR2O95944 276 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
SSRP1-201ENST00000278412 GATA1P15976 413 aaPredicted RBP8.58□□□□□ -1.04
SSRP1-201ENST00000278412 LENEPQ9Y5L5 61 aa8.58□□□□□ -1.04
SSRP1-201ENST00000278412 TRAV26-2A0A0B4J265 109 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 G3V4G9 280 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 PMCHL1Q16048 86 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 BEAN1Q3B7T3 259 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 LOC102724200A0A096LPH7 203 aaPredicted RBP8.57□□□□□ -1.04
SSRP1-201ENST00000278412 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
SSRP1-201ENST00000278412 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 C3orf56Q8N813 242 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 DNHD1Q96M86 4753 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 AZU1P20160 251 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 AMTP48728 403 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 OR10J3Q5JRS4 329 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 SAMD13Q5VXD3 122 aa8.56□□□□□ -1.04
SSRP1-201ENST00000278412 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 TRAV25A0A0B4J276 109 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
SSRP1-201ENST00000278412 STHQ8IWL8 128 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 TRAV2A0A0B4J234 112 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 LEPP41159 167 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 PET117Q6UWS5 81 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 FAM159AQ6UWV7 190 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 ERASQ7Z444 233 aa8.55□□□□□ -1.04
SSRP1-201ENST00000278412 TRPT1Q86TN4 253 aaKnown RBP8.55□□□□□ -1.04
SSRP1-201ENST00000278412 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
SSRP1-201ENST00000278412 HLA-DQA1P01909 254 aa8.54□□□□□ -1.04
SSRP1-201ENST00000278412 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
SSRP1-201ENST00000278412 MDFIQ99750 246 aa8.54□□□□□ -1.04
SSRP1-201ENST00000278412 C1orf158Q8N1D5 194 aa8.54□□□□□ -1.04
SSRP1-201ENST00000278412 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
SSRP1-201ENST00000278412 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 A8MTW9 85 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 ASIPP42127 132 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 RIGQ13278 110 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 SPANXN1Q5VSR9 72 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 WDR73Q6P4I2 378 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 URB1-AS1Q96HZ7 61 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 A0A087WWL8 130 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 D6R8Y8 96 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 BVES-AS1Q5T3Y7 98 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
SSRP1-201ENST00000278412 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 MRPL51Q4U2R6 128 aaKnown RBP8.53□□□□□ -1.04
SSRP1-201ENST00000278412 MPV17L2Q567V2 206 aa8.53□□□□□ -1.04
SSRP1-201ENST00000278412 A0A1B0GV72 72 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 SNAI2O43623 268 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 PMCHP20382 165 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 FAM19A2Q8N3H0 131 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 CNFNQ9BYD5 112 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 DNAH3Q8TD57 4116 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 ATOH7Q8N100 152 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 LINC01587Q99440 93 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 ZNF747Q9BV97 191 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 PHLDA3Q9Y5J5 127 aa8.52□□□□□ -1.05
SSRP1-201ENST00000278412 LOC389332A0A1B0GUA5 103 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 PRB2P02812 416 aaPredicted RBP8.51□□□□□ -1.05
SSRP1-201ENST00000278412 MT-ND6P03923 174 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 C12orf54Q6X4T0 127 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 TRAV8-6A0A0B4J262 113 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 OR5AL1P0C617 328 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 UFSP1Q6NVU6 142 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 SCRT2Q9NQ03 307 aa8.51□□□□□ -1.05
SSRP1-201ENST00000278412 IGHV3-73A0A0B4J1V6 119 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 NPYP01303 97 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 C9orf66Q5T8R8 295 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 RASL11AQ6T310 242 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 Q9UF83 564 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 WFDC9Q8NEX5 89 aa8.5□□□□□ -1.05
SSRP1-201ENST00000278412 FAM74A4Q5TZK3 123 aa8.49□□□□□ -1.05
SSRP1-201ENST00000278412 ZNF493Q6ZR52 646 aa8.49□□□□□ -1.05
SSRP1-201ENST00000278412 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
SSRP1-201ENST00000278412 NUDT3O95989 172 aa8.49□□□□□ -1.05
SSRP1-201ENST00000278412 COX19Q49B96 90 aa8.49□□□□□ -1.05
SSRP1-201ENST00000278412 MGPP08493 103 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 C9orf85Q96MD7 179 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 ST20Q9HBF5 79 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 INSP01308 110 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 RNASEKQ6P5S7 137 aaKnown RBP8.48□□□□□ -1.05
SSRP1-201ENST00000278412 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
SSRP1-201ENST00000278412 TMEM191AQ9H0A3 160 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
SSRP1-201ENST00000278412 SMIM17P0DL12 118 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 C11orf72Q8NBR9 251 aa8.48□□□□□ -1.05
SSRP1-201ENST00000278412 CSNK1G2-AS1Q8NCQ2 148 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms