RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 MAP1LC3BQ9GZQ8 125 aa11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 FAM30AQ9NZY2 134 aa11.6□□□□□ -0.55
CSNK1D-201ENST00000269361 MYCBP2O75592 4640 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 G3V3Q6 166 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 C1QBP02746 253 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 UBE2G1P62253 170 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 FAM74A4Q5TZK3 123 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 CYTL1Q9NRR1 136 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 PHLDA3Q9Y5J5 127 aa11.59□□□□□ -0.55
CSNK1D-201ENST00000269361 A0A087WWL8 130 aa11.58□□□□□ -0.56
CSNK1D-201ENST00000269361 TRBV6-1A0A0K0K1D8 114 aa11.58□□□□□ -0.56
CSNK1D-201ENST00000269361 FHITP49789 147 aa11.58□□□□□ -0.56
CSNK1D-201ENST00000269361 ZNF674Q2M3X9 581 aa11.58□□□□□ -0.56
CSNK1D-201ENST00000269361 TCEAL7Q9BRU2 100 aa11.58□□□□□ -0.56
CSNK1D-201ENST00000269361 TMSB15BA0A087X1C1 80 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 LECT2O14960 151 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 ARPC5O15511 151 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 LTAP01374 205 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 TPT1P13693 172 aaKnown RBP11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 CST9LP1Q5W188 147 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 STOML3Q8TAV4 291 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 COX11Q9Y6N1 276 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
CSNK1D-201ENST00000269361 M0R381 172 aa11.56□□□□□ -0.56
CSNK1D-201ENST00000269361 NIT1Q86X76 327 aa11.56□□□□□ -0.56
CSNK1D-201ENST00000269361 ZFP82Q8N141 532 aa11.55□□□□□ -0.56
CSNK1D-201ENST00000269361 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
CSNK1D-201ENST00000269361 SEC11BP0C7V7 166 aa11.54□□□□□ -0.56
CSNK1D-201ENST00000269361 RMI2Q96E14 147 aa11.54□□□□□ -0.56
CSNK1D-201ENST00000269361 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 TRBV10-1A0A0K0K1A3 114 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 PAGE4O60829 102 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 AKR1C3P42330 323 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 Q6ZSA8 131 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 DNAJC30Q96LL9 226 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 KLK12Q9UKR0 248 aa11.53□□□□□ -0.56
CSNK1D-201ENST00000269361 A0A087WX48 190 aa11.52□□□□□ -0.57
CSNK1D-201ENST00000269361 RPL36AP83881 106 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-201ENST00000269361 RGS21Q2M5E4 152 aa11.52□□□□□ -0.57
CSNK1D-201ENST00000269361 RPL36ALQ969Q0 106 aaKnown RBP11.52□□□□□ -0.57
CSNK1D-201ENST00000269361 TRBV7-3A0A075B6L6 115 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 IGKV2D-24A0A075B6R9 120 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 SMLR1H3BR10 107 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 S100A9P06702 114 aaKnown RBP11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 UBE2D3P61077 147 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 UBE2D2P62837 147 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 ELOBQ15370 118 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 Q8N976 141 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 MBD3L1Q8WWY6 194 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 FLG2Q5D862 2391 aaPredicted RBP11.51□□□□□ -0.57
CSNK1D-201ENST00000269361 KCNIP4Q6PIL6 250 aa11.5□□□□□ -0.57
CSNK1D-201ENST00000269361 KCNRGQ8N5I3 272 aa11.5□□□□□ -0.57
CSNK1D-201ENST00000269361 UBE2WQ96B02 151 aa11.5□□□□□ -0.57
CSNK1D-201ENST00000269361 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 PLA2G1BP04054 148 aaKnown RBP11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 RAB4BP61018 213 aa11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 OR10G8Q8NGN5 311 aa11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
CSNK1D-201ENST00000269361 A0A1B0GV50 99 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 RPL19P84098 196 aaKnown RBP11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 ZNF345Q14585 488 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 ATRAIDQ6UW56 229 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 LINC00528Q8N1L1 170 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 OR10AG1Q8NH19 301 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 MLST8Q9BVC4 326 aa11.48□□□□□ -0.57
CSNK1D-201ENST00000269361 TRBV6-8A0A0A6YYG3 113 aa11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 TMEM262E9PQX1 116 aa11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 CXCL1P09341 107 aa11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 BAGE2Q86Y30 109 aa11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 ZNF471Q9BX82 626 aaPredicted RBP11.47□□□□□ -0.57
CSNK1D-201ENST00000269361 PFDN1O60925 122 aa11.46□□□□□ -0.57
CSNK1D-201ENST00000269361 Q0VG73 95 aa11.46□□□□□ -0.57
CSNK1D-201ENST00000269361 ZNF56Q15929 161 aa11.46□□□□□ -0.57
CSNK1D-201ENST00000269361 PRR27Q6MZM9 219 aa11.46□□□□□ -0.57
CSNK1D-201ENST00000269361 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
CSNK1D-201ENST00000269361 SNAI2O43623 268 aa11.45□□□□□ -0.58
CSNK1D-201ENST00000269361 NEXN-AS1Q8NBZ9 246 aa11.45□□□□□ -0.58
CSNK1D-201ENST00000269361 A0A0D9SG52 128 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 MUC21A0A0G2JKD1 596 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 MUC21A0A140T8X8 626 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 HMSDA8MTL9 139 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 H2AFB1P0C5Y9 115 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 OR5AL1P0C617 328 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 ENHOQ6UWT2 76 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 TMUB2Q71RG4 321 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
CSNK1D-201ENST00000269361 F5H697 171 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 J3QL48 77 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 BCL2L11O43521 198 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 SPANXN1Q5VSR9 72 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
CSNK1D-201ENST00000269361 C1orf43Q9BWL3 253 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms