RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ADAMTSL5Q6ZMM2 481 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 OR4C5Q8NGB2 326 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 C20orf78Q9BR46 151 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 A0A087WX48 190 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
CPSF6-201ENST00000266679 NXPH4O95158 308 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 LGALS1P09382 135 aaKnown RBP9.63□□□□□ -0.87
CPSF6-201ENST00000266679 CD7P09564 240 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
CPSF6-201ENST00000266679 TRAV12-2A0A075B6T6 113 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 HOXA3O43365 443 aaPredicted RBP9.62□□□□□ -0.87
CPSF6-201ENST00000266679 FSHBP01225 129 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 Q6YL49 198 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 NEGR1Q7Z3B1 354 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 SCGB3A1Q96QR1 104 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 JPT2Q9H910 190 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 STAB1Q9NY15 2570 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 A6NDN8 102 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 K7EQG2 157 aa9.62□□□□□ -0.87
CPSF6-201ENST00000266679 SNRPD3P62318 126 aaKnown RBP9.62□□□□□ -0.87
CPSF6-201ENST00000266679 A0A0J9YX75 114 aa9.61□□□□□ -0.87
CPSF6-201ENST00000266679 TOMM6Q96B49 74 aa9.61□□□□□ -0.87
CPSF6-201ENST00000266679 CSTL1Q9H114 145 aa9.61□□□□□ -0.87
CPSF6-201ENST00000266679 A0A087WWL8 130 aa9.6□□□□□ -0.87
CPSF6-201ENST00000266679 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
CPSF6-201ENST00000266679 MDFIQ99750 246 aa9.6□□□□□ -0.87
CPSF6-201ENST00000266679 YAE1D1Q9NRH1 226 aa9.6□□□□□ -0.87
CPSF6-201ENST00000266679 KIF25-AS1Q9Y6Z4 181 aa9.6□□□□□ -0.87
CPSF6-201ENST00000266679 ELANEP08246 267 aa9.6□□□□□ -0.87
CPSF6-201ENST00000266679 LINC00315P59091 139 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 SPINK13Q1W4C9 94 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 POM121L12Q8N7R1 296 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 DEFB104AQ8WTQ1 72 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 NAA38Q9BRA0 125 aaKnown RBP9.59□□□□□ -0.87
CPSF6-201ENST00000266679 CHAC1Q9BUX1 264 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 AGRNO00468 2067 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 H7C1H1 209 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 PLNP26678 52 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
CPSF6-201ENST00000266679 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
CPSF6-201ENST00000266679 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 F5H697 171 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 F8VRH5 84 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 H3BRM9 83 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 LGALS9O00182 355 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 CRLF1O75462 422 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 PPP1R17O96001 155 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 DEFB136Q30KP8 78 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 RAB37Q96AX2 223 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 GCSHP23434 173 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 SLURP1P55000 103 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 FAM74A4Q5TZK3 123 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 MAPKAPK5-AS1Q8N8E1 139 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
CPSF6-201ENST00000266679 TRBV25-1A0A075B6N4 114 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 K7EMI3 77 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 NEXN-AS1Q8NBZ9 246 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 BAALCQ8WXS3 180 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 C9orf85Q96MD7 179 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
CPSF6-201ENST00000266679 C9orf118A6NHY6 69 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 H3BUT2 72 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 K7EP13 123 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 CDKN1BP46527 198 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 Q8N1Y9 231 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 IGHV1OR15-1A0A075B7D0 117 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 FXYD2P54710 66 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 TCTEX1D4Q5JR98 221 aa9.56□□□□□ -0.88
CPSF6-201ENST00000266679 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
CPSF6-201ENST00000266679 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
CPSF6-201ENST00000266679 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
CPSF6-201ENST00000266679 ZNF56Q15929 161 aa9.55□□□□□ -0.88
CPSF6-201ENST00000266679 FOXI2Q6ZQN5 318 aa9.55□□□□□ -0.88
CPSF6-201ENST00000266679 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
CPSF6-201ENST00000266679 TP53TG1Q9Y2A0 90 aa9.55□□□□□ -0.88
CPSF6-201ENST00000266679 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 KHDC1LQ5JSQ8 128 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 HIST2H2BDQ6DRA6 164 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 RNF152Q8N8N0 203 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 DUX3Q96PT4 197 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 CYSLTR1Q9Y271 337 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
CPSF6-201ENST00000266679 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
CPSF6-201ENST00000266679 FBN3Q75N90 2809 aa9.53□□□□□ -0.88
CPSF6-201ENST00000266679 K7ERJ3 54 aa9.53□□□□□ -0.88
CPSF6-201ENST00000266679 RPL32P62910 135 aaKnown RBP9.53□□□□□ -0.88
CPSF6-201ENST00000266679 AMTNQ6UX39 209 aa9.53□□□□□ -0.88
CPSF6-201ENST00000266679 ANK2Q01484 3957 aa9.53□□□□□ -0.88
CPSF6-201ENST00000266679 SDHAF1A6NFY7 115 aa9.52□□□□□ -0.88
CPSF6-201ENST00000266679 GAGE10A6NGK3 116 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms