RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
SQLE-201ENST00000265896 TMEM170BQ5T4T1 132 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 SMPXQ9UHP9 88 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 A0A1B0GWB2 263 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 NEXN-AS1Q8NBZ9 246 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 U3KQE9 123 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 C9orf139Q6ZV77 190 aa12.63□□□□□ -0.39
SQLE-201ENST00000265896 SPAG8Q99932 426 aaPredicted RBP12.63□□□□□ -0.39
SQLE-201ENST00000265896 GNLYP22749 145 aa12.63□□□□□ -0.39
SQLE-201ENST00000265896 PSMB2P49721 201 aa12.63□□□□□ -0.39
SQLE-201ENST00000265896 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 TOMM6Q96B49 74 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 SPANXB1Q9NS25 103 aaPredicted RBP12.62□□□□□ -0.39
SQLE-201ENST00000265896 TSHBP01222 138 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 SAMD13Q5VXD3 122 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 MDFICQ9P1T7 246 aa12.62□□□□□ -0.39
SQLE-201ENST00000265896 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
SQLE-201ENST00000265896 ORMDL2Q53FV1 153 aa12.61□□□□□ -0.39
SQLE-201ENST00000265896 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
SQLE-201ENST00000265896 RRN3P1Q2M238 152 aa12.61□□□□□ -0.39
SQLE-201ENST00000265896 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
SQLE-201ENST00000265896 C20orf78Q9BR46 151 aa12.61□□□□□ -0.39
SQLE-201ENST00000265896 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
SQLE-201ENST00000265896 CRYGDP07320 174 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 TSPEAR-AS2P59090 65 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 ZNF580Q9UK33 172 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 IGHV1-69DA0A0B4J2H0 117 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 ADARB2-AS1A8MUL3 147 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 IGHV1-69P01742 117 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 RNASE13Q5GAN3 156 aaKnown RBP12.6□□□□□ -0.39
SQLE-201ENST00000265896 PSMG4Q5JS54 123 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 FAM159AQ6UWV7 190 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 AVPP01185 164 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 SUMO4Q6EEV6 95 aa12.6□□□□□ -0.39
SQLE-201ENST00000265896 SOCS3O14543 225 aa12.59□□□□□ -0.39
SQLE-201ENST00000265896 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
SQLE-201ENST00000265896 ZNF56Q15929 161 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 SPINK13Q1W4C9 94 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 DOPEY1Q5JWR5 2465 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 GAGE12HA6NDE8 117 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 ZNF462Q96JM2 2506 aa12.58□□□□□ -0.4
SQLE-201ENST00000265896 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
SQLE-201ENST00000265896 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
SQLE-201ENST00000265896 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
SQLE-201ENST00000265896 SDHAF1A6NFY7 115 aa12.57□□□□□ -0.4
SQLE-201ENST00000265896 P0DMU3 169 aa12.56□□□□□ -0.4
SQLE-201ENST00000265896 FAM231AP0DMU4 169 aa12.56□□□□□ -0.4
SQLE-201ENST00000265896 FAM231CP0DMU5 169 aa12.56□□□□□ -0.4
SQLE-201ENST00000265896 ZNRF2Q8NHG8 242 aa12.56□□□□□ -0.4
SQLE-201ENST00000265896 PRRC2AP48634 2157 aaKnown RBP12.56□□□□□ -0.4
SQLE-201ENST00000265896 OVOL1O14753 267 aa12.56□□□□□ -0.4
SQLE-201ENST00000265896 FAM223BA6NKX1 122 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 NDUFA4O00483 81 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
SQLE-201ENST00000265896 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 Q9UF83 564 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 LINC00315P59091 139 aa12.55□□□□□ -0.4
SQLE-201ENST00000265896 MRPL53Q96EL3 112 aaKnown RBP12.55□□□□□ -0.4
SQLE-201ENST00000265896 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 PROK1P58294 105 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 SIGMAR1Q99720 223 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 TSPAN13O95857 204 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 ATP5J2P56134 94 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
SQLE-201ENST00000265896 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 SMCPP49901 116 aaPredicted RBP12.54□□□□□ -0.4
SQLE-201ENST00000265896 NPC2P61916 151 aa12.54□□□□□ -0.4
SQLE-201ENST00000265896 F8W1H4 67 aa12.53□□□□□ -0.4
SQLE-201ENST00000265896 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
SQLE-201ENST00000265896 DAZ1Q9NQZ3 744 aaKnown RBP12.53□□□□□ -0.4
SQLE-201ENST00000265896 MTORP42345 2549 aa12.53□□□□□ -0.4
SQLE-201ENST00000265896 BEX4Q9NWD9 120 aaPredicted RBP12.53□□□□□ -0.4
SQLE-201ENST00000265896 PRSS47A8MTI9 375 aa12.52□□□□□ -0.4
SQLE-201ENST00000265896 IGHV4-59P01825 116 aa12.52□□□□□ -0.4
SQLE-201ENST00000265896 SCGB1C2P0DMR2 95 aa12.52□□□□□ -0.4
SQLE-201ENST00000265896 Q8N1Y9 231 aa12.52□□□□□ -0.4
SQLE-201ENST00000265896 PRO0461Q9UI25 63 aa12.52□□□□□ -0.4
SQLE-201ENST00000265896 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
SQLE-201ENST00000265896 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
SQLE-201ENST00000265896 DUX3Q96PT4 197 aa12.52□□□□□ -0.41
SQLE-201ENST00000265896 KIR2DL4Q99706 377 aa12.52□□□□□ -0.41
SQLE-201ENST00000265896 KIF25-AS1Q9Y6Z4 181 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 NDUFS8O00217 210 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 CCL19Q99731 98 aa12.51□□□□□ -0.41
SQLE-201ENST00000265896 A8MZ25 164 aa12.5□□□□□ -0.41
SQLE-201ENST00000265896 COX6B1P14854 86 aa12.5□□□□□ -0.41
SQLE-201ENST00000265896 Q5PR19 223 aa12.5□□□□□ -0.41
SQLE-201ENST00000265896 A0A0J9YY99 117 aa12.5□□□□□ -0.41
SQLE-201ENST00000265896 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
SQLE-201ENST00000265896 IGHG2P01859 326 aa12.49□□□□□ -0.41
SQLE-201ENST00000265896 PMVKQ15126 192 aa12.49□□□□□ -0.41
SQLE-201ENST00000265896 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
SQLE-201ENST00000265896 FHL3Q13643 280 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms