RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CEP295Q9C0D2 2601 aa10.76□□□□□ -0.69
CDH3-201ENST00000264012 NXPH4O95158 308 aa10.76□□□□□ -0.69
CDH3-201ENST00000264012 EIF4EBP1Q13541 118 aaPredicted RBP10.76□□□□□ -0.69
CDH3-201ENST00000264012 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
CDH3-201ENST00000264012 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
CDH3-201ENST00000264012 PLA2G5P39877 138 aa10.76□□□□□ -0.69
CDH3-201ENST00000264012 TNFRSF13BO14836 293 aaPredicted RBP10.75□□□□□ -0.69
CDH3-201ENST00000264012 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 A0A0J9YY99 117 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 FSTL3O95633 263 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 C9orf66Q5T8R8 295 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 Q8N1Y9 231 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 PPDPFLQ8WWR9 84 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 DSCAMO60469 2012 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 CEND1Q8N111 149 aa10.75□□□□□ -0.69
CDH3-201ENST00000264012 CLPSL2Q6UWE3 100 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 CENPFP49454 3210 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 PLXNB1O43157 2135 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 C2CD3Q4AC94 2353 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 FRMD6-AS1P0C7T7 363 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 LOXL1Q08397 574 aaPredicted RBP10.74□□□□□ -0.69
CDH3-201ENST00000264012 PCP2Q8IVA1 136 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 CCDC140Q96MF4 163 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
CDH3-201ENST00000264012 TRBV6-1A0A0K0K1D8 114 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 DNAJC30Q96LL9 226 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 SORL1Q92673 2214 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 CTRLP40313 264 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 FGF6P10767 208 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 NUP210LQ5VU65 1888 aa10.73□□□□□ -0.69
CDH3-201ENST00000264012 C19orf71A6NCJ1 209 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 BOD1L2Q8IYS8 172 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 K7ERJ3 54 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 CDK2AP2O75956 126 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 ZFP2Q6ZN57 461 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 C16orf74Q96GX8 76 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 PIFOQ8TCI5 191 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
CDH3-201ENST00000264012 PTPRSQ13332 1948 aa10.71□□□□□ -0.69
CDH3-201ENST00000264012 XCL1P47992 114 aa10.71□□□□□ -0.7
CDH3-201ENST00000264012 Q6ZVH6 145 aa10.71□□□□□ -0.7
CDH3-201ENST00000264012 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.7
CDH3-201ENST00000264012 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
CDH3-201ENST00000264012 F8WEM9 126 aa10.7□□□□□ -0.7
CDH3-201ENST00000264012 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
CDH3-201ENST00000264012 YPEL4Q96NS1 127 aa10.7□□□□□ -0.7
CDH3-201ENST00000264012 CITED2Q99967 270 aaPredicted RBP10.7□□□□□ -0.7
CDH3-201ENST00000264012 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
CDH3-201ENST00000264012 RMI2Q96E14 147 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 A0A0J9YX75 114 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 K7EQD1 137 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 IGHG4P01861 327 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 CRYGBP07316 175 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 MYCNOSP40205 109 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 C11orf71Q6IPW1 123 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 RNASE8Q8TDE3 154 aaKnown RBP10.69□□□□□ -0.7
CDH3-201ENST00000264012 Q6ZQT7 251 aa10.69□□□□□ -0.7
CDH3-201ENST00000264012 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 IGF1P05019 195 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 Q9H8V8 135 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 SCRT2Q9NQ03 307 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 GYPEP15421 78 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 C12orf74Q32Q52 190 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 IGLV2-8P01709 118 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 NKAPP1Q8N9T2 125 aa10.68□□□□□ -0.7
CDH3-201ENST00000264012 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 EBI3Q14213 229 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 H3BMM0 161 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 LINC00322Q6ZN03 302 aaPredicted RBP10.67□□□□□ -0.7
CDH3-201ENST00000264012 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 H3BMG7 143 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 RPL39P62891 51 aaKnown RBP10.67□□□□□ -0.7
CDH3-201ENST00000264012 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
CDH3-201ENST00000264012 C5orf38Q86SI9 138 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 LRRC75A-AS1Q8N1F1 130 aa10.67□□□□□ -0.7
CDH3-201ENST00000264012 TRAV13-2A0A0B4J235 113 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 ATP5G1P05496 136 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 SPART-AS1P0CW21 52 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
CDH3-201ENST00000264012 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
CDH3-201ENST00000264012 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
CDH3-201ENST00000264012 MDFICQ9P1T7 246 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
CDH3-201ENST00000264012 ANKRD11Q6UB99 2663 aaPredicted RBP10.66□□□□□ -0.7
CDH3-201ENST00000264012 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.7
CDH3-201ENST00000264012 TAX1BP3O14907 124 aa10.65□□□□□ -0.7
CDH3-201ENST00000264012 IGHV4-31P0DP07 118 aa10.65□□□□□ -0.7
CDH3-201ENST00000264012 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms