RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 DUX5Q96PT3 197 aa9.32□□□□□ -0.92
CHMP3-201ENST00000263856 USP9YO00507 2555 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-201ENST00000263856 NDUFA4O00483 81 aa9.32□□□□□ -0.92
CHMP3-201ENST00000263856 CELSR2Q9HCU4 2923 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 Q1RN00 199 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 BEX4Q9NWD9 120 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-201ENST00000263856 TRAV2A0A0B4J234 112 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 IGHV1-69DA0A0B4J2H0 117 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 PRSS47A8MTI9 375 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 IGHV1-69P01742 117 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 CRYGDP07320 174 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 NBL1P41271 181 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
CHMP3-201ENST00000263856 TSHBP01222 138 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 LGALS3P17931 250 aaKnown RBP9.3□□□□□ -0.92
CHMP3-201ENST00000263856 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 ADARB2-AS1A8MUL3 147 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 PMVKQ15126 192 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 LENEPQ9Y5L5 61 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 POLQO75417 2590 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 CENPEQ02224 2701 aa9.3□□□□□ -0.92
CHMP3-201ENST00000263856 IGHV4-39P01824 125 aa9.29□□□□□ -0.92
CHMP3-201ENST00000263856 RNASE13Q5GAN3 156 aaKnown RBP9.29□□□□□ -0.92
CHMP3-201ENST00000263856 C10orf99Q6UWK7 81 aa9.29□□□□□ -0.92
CHMP3-201ENST00000263856 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
CHMP3-201ENST00000263856 IGLV4-69A0A075B6H9 119 aa9.29□□□□□ -0.92
CHMP3-201ENST00000263856 FOXI1Q12951 378 aa9.29□□□□□ -0.92
CHMP3-201ENST00000263856 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
CHMP3-201ENST00000263856 SOCS3O14543 225 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 NPC2P61916 151 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 A0A0J9YY99 117 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 TCL1BO95988 128 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 SMCPP49901 116 aaPredicted RBP9.28□□□□□ -0.92
CHMP3-201ENST00000263856 CKS1BP61024 79 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 NFE4Q86UQ8 179 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 ZNRF2Q8NHG8 242 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 A0A1B0GV72 72 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 VCYO14598 125 aa9.28□□□□□ -0.92
CHMP3-201ENST00000263856 WNK1Q9H4A3 2382 aa9.27□□□□□ -0.92
CHMP3-201ENST00000263856 C1QTNF4Q9BXJ3 329 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 PPP1R17O96001 155 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 ID1P41134 155 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 NDUFA11Q86Y39 141 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 ATP6V0BQ99437 205 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 ZNF580Q9UK33 172 aa9.27□□□□□ -0.93
CHMP3-201ENST00000263856 J3QQQ9 107 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 CIDEAO60543 219 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 SPINK8P0C7L1 97 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 C2CD3Q4AC94 2353 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 PRSS2P07478 247 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 COX6B1P14854 86 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 KNCNA6PVL3 124 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 PRM2P04554 102 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 CFC1BP0CG36 223 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 CFC1P0CG37 223 aa9.26□□□□□ -0.93
CHMP3-201ENST00000263856 FAM208BQ5VWN6 2430 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 IGIPA6NJ69 53 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 GNLYP22749 145 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 TRPT1Q86TN4 253 aaKnown RBP9.25□□□□□ -0.93
CHMP3-201ENST00000263856 Q8N1Y9 231 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 SPATA25Q9BR10 227 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 SPXQ9BT56 116 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 A4D1N5 150 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 UBE2D1P51668 147 aa9.25□□□□□ -0.93
CHMP3-201ENST00000263856 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 C9JAW5 83 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 P0DMU3 169 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 FAM231AP0DMU4 169 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 FAM231CP0DMU5 169 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 ATP5J2P56134 94 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 LINC00315P59091 139 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 CEMP1Q6PRD7 247 aaPredicted RBP9.24□□□□□ -0.93
CHMP3-201ENST00000263856 MAPK1IP1LQ8NDC0 245 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 USMG5Q96IX5 58 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 PIMREGQ9BSJ6 248 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 UTP20O75691 2785 aaKnown RBP9.24□□□□□ -0.93
CHMP3-201ENST00000263856 A8MWV9 139 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 POLR2KP53803 58 aaKnown RBP9.24□□□□□ -0.93
CHMP3-201ENST00000263856 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 PAPPA-AS1Q5QFB9 102 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 LYRM7Q5U5X0 104 aa9.24□□□□□ -0.93
CHMP3-201ENST00000263856 USP9XQ93008 2570 aaPredicted RBP9.24□□□□□ -0.93
CHMP3-201ENST00000263856 TLN2Q9Y4G6 2542 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 ZANQ9Y493 2812 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 MYO9AB2RTY4 2548 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 IGHG2P01859 326 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 SYNJ2BPP57105 145 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 CCL19Q99731 98 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 PRRC2AP48634 2157 aaKnown RBP9.23□□□□□ -0.93
CHMP3-201ENST00000263856 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
CHMP3-201ENST00000263856 FHL3Q13643 280 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms